U.S. flag

An official website of the United States government

Links from GEO Profiles

    • Showing Current items.

    RABB1C RAB GTPase homolog B1C [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827428, updated on 18-Sep-2024

    Summary

    Official Symbol
    RABB1C
    Official Full Name
    RAB GTPase homolog B1C
    Primary source
    TAIR:AT4G17170
    Locus tag
    AT4G17170
    See related
    Araport:AT4G17170
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS RAB GTPASE HOMOLOG B1B; AT-RAB2; ATRAB-B1B; ATRAB2A; ATRABB1C; DL4620C; FCAALL.365; RAB GTPASE HOMOLOG B1B; RAB GTPase homolog B1C; RAB-B1B; RAB2A
    Summary
    member of RAB gene family
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See RABB1C in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (9644574..9646408, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene RAB GTPase homolog B1A Neighboring gene ncRNA Neighboring gene O-Glycosyl hydrolases family 17 protein Neighboring gene farnesyl diphosphate synthase 2

    Interactions

    General gene information

    NM_117821.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables GTPase activity  
    enables GTPase activity  

    General protein information

    Preferred Names
    RAB GTPase homolog B1C
    NP_193450.1
    • RAB GTPase homolog B1C (RABB1C); FUNCTIONS IN: GTP binding, GTPase activity; INVOLVED IN: ER to Golgi vesicle-mediated transport, pollen sperm cell differentiation, cell growth; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: GTP-binding 2 (TAIR:AT4G35860.1); Has 27116 Blast hits to 27043 proteins in 734 species: Archae - 17; Bacteria - 131; Metazoa - 14131; Fungi - 4055; Plants - 2966; Viruses - 20; Other Eukaryotes - 5796 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      9644574..9646408 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117821.4 → NP_193450.1  RAB GTPase homolog B1C [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193450.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P92963
      UniProtKB/TrEMBL
      A0A178V4V1, A0A5S9XTC4
      Conserved Domains (1) summary
      PLN03108
      Location:1 → 210
      PLN03108; Rab family protein; Provisional
    External link. Please review our privacy policy.