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    WAG1 WAG 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841807, updated on 18-Sep-2024

    Summary

    Official Symbol
    WAG1
    Official Full Name
    WAG 1
    Primary source
    TAIR:AT1G53700
    Locus tag
    AT1G53700
    See related
    Araport:AT1G53700
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22G10.21; F22G10_21; PK3AT; PROTEIN KINASE 3 ARABIDOPSIS THALIANA; WAG 1
    Summary
    The WAG1 and its homolog, WAG2 each encodes a protein-serine/threonine kinase that are nearly 70% identical to PsPK3 protein. All three together with CsPK3 belong to PsPK3-type kinases. At the N-terminus, all four possess a serine/threonine-rich domain. They are closely related to Arabidopsis kinases PINOID. wag1/wag2 double mutants exhibit a pronounced wavy root phenotype when grown vertically on agar plates (while wild-type plants develop wavy roots only on plates inclined to angles less than 90 degrees), indicating an overlapping role for WAG1 and WAG2 as suppressors of root waving. Simultaneous disruption of PID(AT2G34650) and its 3 closest homologs (PID2/AT2G26700, WAG1/AT1G53700, and WAG2/AT3G14370) abolishes the formation of cotyledons.
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    Genomic context

    See WAG1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (20048434..20050294)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene DNA directed RNA polymerase, 7 kDa subunit Neighboring gene putative aminoacyl-tRNA ligase Neighboring gene ncRNA Neighboring gene ROTUNDIFOLIA like 9

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    NM_104248.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables protein serine/threonine kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within auxin polar transport IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within cotyledon development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    NOT involved_in gravitropism IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    acts_upstream_of_or_within root development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    WAG 1
    NP_175774.1
    • WAG 1 (WAG1); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G14370.1); Has 97126 Blast hits to 96120 proteins in 2766 species: Archae - 63; Bacteria - 12090; Metazoa - 36361; Fungi - 11348; Plants - 19901; Viruses - 394; Other Eukaryotes - 16969 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      20048434..20050294
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_104248.4NP_175774.1  WAG 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_175774.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O81661, Q9C8M5
      UniProtKB/TrEMBL
      A0A178W0E4, A0A5S9WLP1
      Conserved Domains (1) summary
      cd05574
      Location:91416
      STKc_phototropin_like; Catalytic domain of Phototropin-like Serine/Threonine Kinases