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    TCP10 TCP domain protein 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817659, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TCP10
    Official Full Name
    TCP domain protein 10
    Primary source
    TAIR:AT2G31070
    Locus tag
    AT2G31070
    See related
    Araport:AT2G31070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T16B12.12; T16B12_12; TCP domain protein 10
    Summary
    TCP family protein involved in heterchronic regulation of leaf differentiation.
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    Genomic context

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    See TCP10 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (13220478..13222642, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Cupredoxin superfamily protein Neighboring gene elongation factor family protein Neighboring gene pseudo Neighboring gene CLAVATA3/ESR-RELATED 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. DNA-TCP complex structures reveal a unique recognition mechanism for TCP transcription factor families. Zhang Y, et al. Nucleic Acids Res, 2023 Jan 11. PMID 36546761, Free PMC Article
    2. An indole-3-acetic acid carboxyl methyltransferase regulates Arabidopsis leaf development. Qin G, et al. Plant Cell, 2005 Oct. PMID 16169896, Free PMC Article
    3. TCP transcription factors interact with AS2 in the repression of class-I KNOX genes in Arabidopsis thaliana. Li Z, et al. Plant J, 2012 Jul. PMID 22380849
    4. A protracted and dynamic maturation schedule underlies Arabidopsis leaf development. Efroni I, et al. Plant Cell, 2008 Sep. PMID 18805992, Free PMC Article
    5. Two types of putative nuclear factors that physically interact with histidine-containing phosphotransfer (Hpt) domains, signaling mediators in His-to-Asp phosphorelay, in Arabidopsis thaliana. Suzuki T, et al. Plant Cell Physiol, 2001 Jan. PMID 11158442

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. DNA-TCP complex structures reveal a unique recognition mechanism for TCP transcription factor families.
      Title: DNA-TCP complex structures reveal a unique recognition mechanism for TCP transcription factor families.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_128662.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell differentiation IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within leaf development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within leaf development TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within leaf morphogenesis IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within leaf senescence IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within positive regulation of development, heterochronic IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within regulation of DNA-templated transcription TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    TCP domain protein 10
    NP_565712.1
    • TCP domain protein 10 (TCP10); CONTAINS InterPro DOMAIN/s: Transcription factor, TCP (InterPro:IPR005333), Transcription factor TCP subgroup (InterPro:IPR017887); BEST Arabidopsis thaliana protein match is: TCP family transcription factor 4 (TAIR:AT3G15030.3); Has 1897 Blast hits to 1802 proteins in 357 species: Archae - 0; Bacteria - 4; Metazoa - 259; Fungi - 36; Plants - 1423; Viruses - 0; Other Eukaryotes - 175 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13220478..13222642 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128662.2 → NP_565712.1  TCP domain protein 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565712.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O82277
      UniProtKB/TrEMBL
      A0A5S9X350, A0A654EZ53
      Conserved Domains (1) summary
      cl23822
      Location:27 → 87
      TCP; TCP family transcription factor
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O82277.1

    Gene LinkOut

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