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    hypothetical protein (DUF3527) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817500, updated on 18-Sep-2024

    Summary

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    Official Full Name
    hypothetical protein (DUF3527)
    Primary source
    TAIR:AT2G29510
    Locus tag
    AT2G29510
    See related
    Araport:AT2G29510
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16P2.11; F16P2_11
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (12634437..12638043)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase TAU 1 Neighboring gene HSP20-like chaperones superfamily protein Neighboring gene tRNA-Val Neighboring gene Inositol phosphorylceramide synthase 3 Neighboring gene ncRNA Neighboring gene Tim10/DDP family zinc finger protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_128505.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    hypothetical protein (DUF3527)
    NP_180512.1
    • Protein of unknown function (DUF3527); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3527 (InterPro:IPR021916); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF3527) (TAIR:AT5G59020.1); Has 3861 Blast hits to 705 proteins in 135 species: Archae - 0; Bacteria - 66; Metazoa - 411; Fungi - 77; Plants - 149; Viruses - 10; Other Eukaryotes - 3148 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      12634437..12638043
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128505.5 → NP_180512.1  hypothetical protein (DUF3527) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180512.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X2G1, Q9ZW32
      Conserved Domains (1) summary
      pfam12043
      Location:522 → 775
      DUF3527; Domain of unknown function (DUF3527)
    Nucleotide Protein
    Heading Accession and Version

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