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    HEMA3 Glutamyl-tRNA reductase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817682, updated on 18-Sep-2024

    Summary

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    Official Symbol
    HEMA3
    Official Full Name
    Glutamyl-tRNA reductase family protein
    Primary source
    TAIR:AT2G31250
    Locus tag
    AT2G31250
    See related
    Araport:AT2G31250
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F16D14.9; F16D14_9
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    Genomic context

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    See HEMA3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Sequence:
    Chromosome: 2; NC_003071.7 (13319621..13321597, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ethylene-responsive element binding factor 15 Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene autophagy 9 (APG9) Neighboring gene CDT1-like protein A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A second and differentially expressed glutamyl-tRNA reductase gene from Arabidopsis thaliana. Kumar AM, et al. Plant Mol Biol, 1996 Feb. PMID 8605295
    2. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_128681.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glutamyl-tRNA reductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in chlorophyll biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within porphyrin-containing compound biosynthetic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in protoporphyrinogen IX biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Glutamyl-tRNA reductase family protein
    NP_180683.1
    • HEMA3; FUNCTIONS IN: glutamyl-tRNA reductase activity, NADP or NADPH binding, binding, shikimate 5-dehydrogenase activity, catalytic activity; INVOLVED IN: porphyrin biosynthetic process; LOCATED IN: chloroplast, cytoplasm; EXPRESSED IN: flower, pollen tube; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase (InterPro:IPR006151), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, conserved site (InterPro:IPR018214), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal (InterPro:IPR015896), NAD(P)-binding domain (InterPro:IPR016040), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase (InterPro:IPR000343), Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal (InterPro:IPR015895); BEST Arabidopsis thaliana protein match is: Glutamyl-tRNA reductase family protein (TAIR:AT1G09940.1); Has 4971 Blast hits to 4969 proteins in 1789 species: Archae - 225; Bacteria - 3606; Metazoa - 2; Fungi - 0; Plants - 223; Viruses - 0; Other Eukaryotes - 915 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      13319621..13321597 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128681.3 → NP_180683.1  Glutamyl-tRNA reductase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180683.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SJX1
      UniProtKB/TrEMBL
      A0A654EXS4
      Conserved Domains (3) summary
      cd05213
      Location:83 → 398
      NAD_bind_Glutamyl_tRNA_reduct; NADP-binding domain of glutamyl-tRNA reductase
      PLN00203
      Location:1 → 513
      PLN00203; glutamyl-tRNA reductase
      pfam00745
      Location:405 → 505
      GlutR_dimer; Glutamyl-tRNAGlu reductase, dimerization domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SJX1.1

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