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    bZIP2 basic leucine-zipper 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816329, updated on 18-Sep-2024

    Summary

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    Official Symbol
    bZIP2
    Official Full Name
    basic leucine-zipper 2
    Primary source
    TAIR:AT2G18160
    Locus tag
    AT2G18160
    See related
    Araport:AT2G18160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATBZIP2; basic leucine-zipper 2; F8D23.6; F8D23_6; FLORAL TRANSITION AT THE MERISTEM3; FTM3; G-BOX BINDING FACTOR 5; GBF5; TRANSCRIPTION FACTOR GBF5
    Summary
    Encodes a b-ZIP transcription factor.
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    Genomic context

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    See bZIP2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_003071.7 (7898012..7899242, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Peroxidase superfamily protein Neighboring gene Peroxidase superfamily protein Neighboring gene MAP kinase 7 Neighboring gene Sec14p-like phosphatidylinositol transfer family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Combinatorial control of Arabidopsis proline dehydrogenase transcription by specific heterodimerisation of bZIP transcription factors. Weltmeier F, et al. EMBO J, 2006 Jul 12. PMID 16810321, Free PMC Article
    2. Two-hybrid protein-protein interaction analysis in Arabidopsis protoplasts: establishment of a heterodimerization map of group C and group S bZIP transcription factors. Ehlert A, et al. Plant J, 2006 Jun. PMID 16709202
    3. bZIP transcription factors in Arabidopsis. Jakoby M, et al. Trends Plant Sci, 2002 Mar. PMID 11906833
    4. Regulation of leaf maturation by chromatin-mediated modulation of cytokinin responses. Efroni I, et al. Dev Cell, 2013 Feb 25. PMID 23449474, Free PMC Article
    5. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Miscellaneous features

    • Loc: c7899042-7898917 AT2G18160.uORF1
    NM_127373.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein heterodimerization activity IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    basic leucine-zipper 2
    NP_179408.1
    • basic leucine-zipper 2 (bZIP2); FUNCTIONS IN: DNA binding, protein heterodimerization activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic leucine-zipper 44 (TAIR:AT1G75390.1); Has 1913 Blast hits to 1913 proteins in 111 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 12; Plants - 1825; Viruses - 0; Other Eukaryotes - 43 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      7898012..7899242 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127373.2 → NP_179408.1  basic leucine-zipper 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_179408.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FVN9, Q9SI15
      UniProtKB/TrEMBL
      A0A178VSN6, A0A5S9WYX5
      Conserved Domains (1) summary
      cd14702
      Location:32 → 83
      bZIP_plant_GBF1; Basic leucine zipper (bZIP) domain of Plant G-box binding factor 1 (GBF1)-like transcription factors: a DNA-binding and dimerization domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SI15.1

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