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    2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837971, updated on 18-Sep-2024

    Summary

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    Official Full Name
    2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    Primary source
    TAIR:AT1G14120
    Locus tag
    AT1G14120
    See related
    Araport:AT1G14120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7A19.20; F7A19_20
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (4833396..4835089, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene fucosyltransferase 9 Neighboring gene ncRNA Neighboring gene 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein Neighboring gene Mitochondrial substrate carrier family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. DAO1 catalyzes temporal and tissue-specific oxidative inactivation of auxin in Arabidopsis thaliana. Zhang J, et al. Proc Natl Acad Sci U S A, 2016 Sep 27. PMID 27651492, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001332107.1
    NM_101277.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables indole-3-acetaldehyde oxidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
    NP_172864.1
    • 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT1G14130.1); Has 6316 Blast hits to 6255 proteins in 769 species: Archae - 0; Bacteria - 698; Metazoa - 67; Fungi - 416; Plants - 4549; Viruses - 0; Other Eukaryotes - 586 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      4833396..4835089 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332106.1 → NP_001322167.1  2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLD1, A0A384LHD2, A0A7G2DVM9, Q9XI76
      Conserved Domains (1) summary
      PLN02365
      Location:1 → 304
      PLN02365; 2-oxoglutarate-dependent dioxygenase

    2. NM_101277.3 → NP_172864.1  2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172864.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLD1, A0A384LHD2, A0A7G2DVM9, Q9XI76
      Conserved Domains (1) summary
      PLN02365
      Location:1 → 304
      PLN02365; 2-oxoglutarate-dependent dioxygenase

    3. NM_001332107.1 → NP_001322168.1  2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLD1, A0A384LHD2, A0A7G2DVM9, Q9XI76
      Conserved Domains (1) summary
      PLN02365
      Location:1 → 304
      PLN02365; 2-oxoglutarate-dependent dioxygenase
    Nucleotide Protein
    Heading Accession and Version

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