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    SRP3 serpin 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842706, updated on 18-Sep-2024

    Summary

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    Official Symbol
    SRP3
    Official Full Name
    serpin 3
    Primary source
    TAIR:AT1G64030
    Locus tag
    AT1G64030
    See related
    Araport:AT1G64030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATSRP3; F22C12.22; F22C12_22; serpin 3
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    Genomic context

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    See SRP3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    2
    Sequence:
    Chromosome: 1; NC_003070.9 (23752789..23754348, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene WRKY DNA-binding protein 56 Neighboring gene Serine protease inhibitor (SERPIN) family protein Neighboring gene Serine protease inhibitor (SERPIN) family protein Neighboring gene miscRNA Neighboring gene type one serine/threonine protein phosphatase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Serpin genes AtSRP2 and AtSRP3 are required for normal growth sensitivity to a DNA alkylating agent in Arabidopsis. Ahn JW, et al. BMC Plant Biol, 2009 May 11. PMID 19426562, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Expression of serpins AtSRP2 and AtSRP3 is required for normal responses of plants following exposure to alkylating genotoxins.
      Title: Serpin genes AtSRP2 and AtSRP3 are required for normal growth sensitivity to a DNA alkylating agent in Arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within DNA repair IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    serpin 3
    NP_176586.1
    • serpin 3 (SRP3); FUNCTIONS IN: serine-type endopeptidase inhibitor activity; INVOLVED IN: DNA repair, response to DNA damage stimulus; LOCATED IN: cytosol; EXPRESSED IN: leaf whorl, sepal, fruit, flower, inflorescence; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protease inhibitor I4, serpin (InterPro:IPR000215); BEST Arabidopsis thaliana protein match is: Serine protease inhibitor (SERPIN) family protein (TAIR:AT1G62170.1); Has 6508 Blast hits to 6454 proteins in 476 species: Archae - 66; Bacteria - 384; Metazoa - 5026; Fungi - 12; Plants - 344; Viruses - 461; Other Eukaryotes - 215 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      23752789..23754348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105076.2 → NP_176586.1  serpin 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_176586.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SH52
      UniProtKB/TrEMBL
      A0A5S9WP46, A0A654EMC9
      Conserved Domains (1) summary
      cd02043
      Location:8 → 371
      serpinP_plants; serpin family P, plant serpins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SH52.2

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