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    LACS9 long chain acyl-CoA synthetase 9 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 844094, updated on 18-Sep-2024

    Summary

    Official Symbol
    LACS9
    Official Full Name
    long chain acyl-CoA synthetase 9
    Primary source
    TAIR:AT1G77590
    Locus tag
    AT1G77590
    See related
    Araport:AT1G77590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    long chain acyl-CoA synthetase 9; T5M16.18; T5M16_18
    Summary
    Encodes major plastidic long chain acyl-CoA synthetase with a slight substrate preference of oleic acid over any of the other fatty acids.
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    Genomic context

    See LACS9 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Sequence:
    Chromosome: 1; NC_003070.9 (29148160..29152395, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Winged helix-turn-helix transcription repressor DNA-binding protein Neighboring gene filament-like protein (DUF869) Neighboring gene ARM repeat superfamily protein Neighboring gene EamA-like transporter family protein Neighboring gene P-loop containing nucleoside triphosphate hydrolases superfamily protein

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    General gene information

    NM_001334788.1
    NM_106407.7

    Gene Ontology Provided by TAIR

    General protein information

    Preferred Names
    long chain acyl-CoA synthetase 9
    NP_177882.1
    • long chain acyl-CoA synthetase 9 (LACS9); FUNCTIONS IN: long-chain fatty acid-CoA ligase activity; INVOLVED IN: fatty acid metabolic process, fatty acid biosynthetic process; LOCATED IN: chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: AMP-binding, conserved site (InterPro:IPR020845), AMP-dependent synthetase/ligase (InterPro:IPR000873); BEST Arabidopsis thaliana protein match is: AMP-dependent synthetase and ligase family protein (TAIR:AT2G04350.2); Has 68698 Blast hits to 57242 proteins in 3549 species: Archae - 1129; Bacteria - 47028; Metazoa - 2860; Fungi - 3365; Plants - 2152; Viruses - 2; Other Eukaryotes - 12162 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      29148160..29152395 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106407.7 → NP_177882.1  long chain acyl-CoA synthetase 9 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177882.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WLQ0, Q84WQ8, Q9CAP8
      UniProtKB/TrEMBL
      A0A178W2C2, A0A7G2E866
      Conserved Domains (1) summary
      PLN02387
      Location:1 → 691
      PLN02387; long-chain-fatty-acid-CoA ligase family protein
    2. NM_001334788.1 → NP_001321320.1  long chain acyl-CoA synthetase 9 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AQK5
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