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    BET10 bromodomain and extraterminal domain protein 10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821083, updated on 18-Sep-2024

    Summary

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    Official Symbol
    BET10
    Official Full Name
    bromodomain and extraterminal domain protein 10
    Primary source
    TAIR:AT3G01770
    Locus tag
    AT3G01770
    See related
    Araport:AT3G01770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATBET10; bromodomain and extraterminal domain protein 10; F28J7.10
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    Genomic context

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    See BET10 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    9
    Sequence:
    Chromosome: 3; NC_003074.8 (275333..278841, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Ankyrin repeat family protein Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene ARM repeat superfamily protein Neighboring gene Ribosomal protein L13 family protein Neighboring gene Ribosome recycling factor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Bromodomain proteins GTE9 and GTE11 are essential for specific BT2-mediated sugar and ABA responses in Arabidopsis thaliana. Misra A, et al. Plant Mol Biol, 2018 Mar. PMID 29363002
    2. A novel family of Ca2+/calmodulin-binding proteins involved in transcriptional regulation: interaction with fsh/Ring3 class transcription activators. Du L, et al. Plant Mol Biol, 2004 Mar. PMID 15316289
    3. Regulation of leaf maturation by chromatin-mediated modulation of cytokinin responses. Efroni I, et al. Dev Cell, 2013 Feb 25. PMID 23449474, Free PMC Article
    4. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    5. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Loss of either GTE9 or GTE11 in a BT2 over-expressing line blocked resistance to sugars and ABA, indicating that both GTE9 and GTE11 were required for BT2 function. [GTE11]
      Title: Bromodomain proteins GTE9 and GTE11 are essential for specific BT2-mediated sugar and ABA responses in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    NM_001337357.1
    NM_111043.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within response to abscisic acid IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    bromodomain and extraterminal domain protein 10
    NP_566151.1
    • bromodomain and extraterminal domain protein 10 (BET10); CONTAINS InterPro DOMAIN/s: Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein match is: bromodomain and extraterminal domain protein 9 (TAIR:AT5G14270.2); Has 12383 Blast hits to 9735 proteins in 571 species: Archae - 25; Bacteria - 644; Metazoa - 6126; Fungi - 1754; Plants - 803; Viruses - 19; Other Eukaryotes - 3012 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      275333..278841 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111043.3 → NP_566151.1  bromodomain and extraterminal domain protein 10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566151.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q93ZB7, Q9S7A8
      UniProtKB/TrEMBL
      A0A178VM80, A0A5S9X888, A0A654F378
      Conserved Domains (2) summary
      cd05506
      Location:130 → 227
      Bromo_plant1; Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with ...
      pfam17035
      Location:279 → 342
      BET; Bromodomain extra-terminal - transcription regulation

    2. NM_001337357.1 → NP_001326912.1  bromodomain and extraterminal domain protein 10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LQQ3
      Conserved Domains (2) summary
      cd05506
      Location:130 → 227
      Bromo_plant1; Bromodomain, uncharacterized subfamily specific to plants. Might function as a global transcription factor. Bromodomains are 110 amino acid long domains, that are found in many chromatin associated proteins. Bromodomains can interact specifically with ...
      pfam17035
      Location:279 → 342
      BET; Bromodomain extra-terminal - transcription regulation
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q93ZB7.1

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