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    ATB' DELTA serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822200, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ATB' DELTA
    Official Full Name
    serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta
    Primary source
    TAIR:AT3G26030
    Locus tag
    AT3G26030
    See related
    Araport:AT3G26030
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MPE11.23; serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta
    Summary
    protein phosphatase 2A regulatory subunit isoform B' delta
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    Genomic context

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    See ATB' DELTA in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (9516953..9519563)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene Protein phosphatase 2A regulatory B subunit family protein Neighboring gene HXXXD-type acyl-transferase family protein Neighboring gene TPX2 (targeting protein for Xklp2) protein family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of Open Stomata1-Interacting Proteins Reveals Interactions with Sucrose Non-fermenting1-Related Protein Kinases2 and with Type 2A Protein Phosphatases That Function in Abscisic Acid Responses. Waadt R, et al. Plant Physiol, 2015 Sep. PMID 26175513, Free PMC Article
    2. High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. Koroleva OA, et al. Plant J, 2005 Jan. PMID 15610358
    3. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    4. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_113507.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein phosphatase regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm HDA PubMed 
    located_in nucleolus HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    part_of protein phosphatase type 2A complex IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta
    NP_189232.1
    • serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta (ATB' DELTA); FUNCTIONS IN: protein phosphatase type 2A regulator activity; INVOLVED IN: signal transduction; LOCATED IN: nucleolus, protein phosphatase type 2A complex, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2A, regulatory B subunit, B56 (InterPro:IPR002554); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2A regulatory B subunit family protein (TAIR:AT3G26020.2); Has 1183 Blast hits to 1155 proteins in 195 species: Archae - 0; Bacteria - 0; Metazoa - 568; Fungi - 166; Plants - 302; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      9516953..9519563
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113507.3 → NP_189232.1  serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B prime delta [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_189232.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9ZQY6
      UniProtKB/TrEMBL
      A0A178VDE2, A0A5S9XFV4, A0A654FHX1
      Conserved Domains (2) summary
      pfam01603
      Location:67 → 471
      B56; Protein phosphatase 2A regulatory B subunit (B56 family)
      cl27532
      Location:13 → 91
      B56; Protein phosphatase 2A regulatory B subunit (B56 family)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9ZQY6.1

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