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    DCD (Development and Cell Death) domain protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820271, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DCD (Development and Cell Death) domain protein
    Primary source
    TAIR:AT3G11000
    Locus tag
    AT3G11000
    See related
    Araport:AT3G11000
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (3447568..3450589)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene LURP-one-like protein (DUF567) Neighboring gene F-box associated ubiquitination effector family protein Neighboring gene receptor like protein 34 Neighboring gene DRE/CRT-binding protein 2B Neighboring gene TRICHOME BIREFRINGENCE-LIKE 32 Neighboring gene Glycosyl hydrolase family 85 Neighboring gene ferritin 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001161132.1
    NM_111937.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in response to endoplasmic reticulum stress IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DCD (Development and Cell Death) domain protein
    NP_001154604.1
    • DCD (Development and Cell Death) domain protein; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01660.1); Has 324 Blast hits to 315 proteins in 40 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 4; Plants - 297; Viruses - 1; Other Eukaryotes - 14 (source: NCBI BLink).
    NP_187711.3
    • DCD (Development and Cell Death) domain protein; LOCATED IN: endomembrane system; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G01660.1); Has 325 Blast hits to 316 proteins in 41 species: Archae - 0; Bacteria - 6; Metazoa - 2; Fungi - 6; Plants - 296; Viruses - 1; Other Eukaryotes - 14 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3447568..3450589
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001161132.1 → NP_001154604.1  DCD (Development and Cell Death) domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001154604.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XAX8, A0A654F742, F4J517
      Conserved Domains (1) summary
      pfam10539
      Location:131 → 259
      Dev_Cell_Death; Development and cell death domain

    2. NM_111937.5 → NP_187711.3  DCD (Development and Cell Death) domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187711.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A8QJE8, Q5PP35
      Conserved Domains (1) summary
      smart00767
      Location:9 → 142
      DCD; DCD is a plant specific domain in proteins involved in development and programmed cell death
    Nucleotide Protein
    Heading Accession and Version

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