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    emb2204 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838814, updated on 18-Sep-2024

    Summary

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    Official Symbol
    emb2204
    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT1G22090
    Locus tag
    AT1G22090
    See related
    Araport:AT1G22090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    embryo defective 2204; F2E2.16; F2E2_16
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    Genomic context

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    See emb2204 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (7795708..7797425)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene transcription factor TGA3 Neighboring gene Cysteine proteinases superfamily protein Neighboring gene ncRNA Neighboring gene Inositol-pentakisphosphate 2-kinase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_102059.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within embryo development ending in seed dormancy NAS
    Non-traceable Author Statement
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_564157.1
    • embryo defective 2204 (emb2204); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF626, Arabidopsis thaliana (InterPro:IPR006462); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF626) (TAIR:AT1G02770.1); Has 202 Blast hits to 201 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7795708..7797425
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102059.2 → NP_564157.1  uncharacterized protein AT1G22090 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564157.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LFT0, Q9LM50
      UniProtKB/TrEMBL
      A0A178WPQ3, A0A5S9VJB1, A0A654EC17
      Conserved Domains (1) summary
      TIGR01572
      Location:6 → 269
      A_thl_para_3677; Arabidopsis paralogous family TIGR01572
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LM50.2

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