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    Aminotransferase-like, plant mobile domain family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838372, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Aminotransferase-like, plant mobile domain family protein
    Primary source
    TAIR:AT1G17930
    Locus tag
    AT1G17930
    See related
    Araport:AT1G17930
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2H15.15; F2H15_15; MAIN; MAINTENANCE OF MERISTEMS
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    6
    Sequence:
    Chromosome: 1; NC_003070.9 (6166220..6168845, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Wall-associated kinase family protein Neighboring gene homeodomain GLABROUS 12 Neighboring gene ncRNA Neighboring gene Endosomal targeting BRO1-like domain-containing protein Neighboring gene myb domain protein 52

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of MAIN, a factor involved in genome stability in the meristems of Arabidopsis thaliana. Wenig U, et al. Plant J, 2013 Aug. PMID 23607329
    2. Arabidopsis proteins with a transposon-related domain act in gene silencing. Ikeda Y, et al. Nat Commun, 2017 May 3. PMID 28466841, Free PMC Article
    3. The plant mobile domain proteins MAIN and MAIL1 interact with the phosphatase PP7L to regulate gene expression and silence transposable elements in Arabidopsis thaliana. Nicolau M, et al. PLoS Genet, 2020 Apr. PMID 32287271, Free PMC Article
    4. MAIN-LIKE1 is a crucial factor for correct cell division and differentiation in Arabidopsis thaliana. Ühlken C, et al. Plant J, 2014 Apr. PMID 24635680
    5. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The plant mobile domain proteins MAIN and MAIL1 interact with the phosphatase PP7L to regulate gene expression and silence transposable elements in Arabidopsis thaliana
      Title: The plant mobile domain proteins MAIN and MAIL1 interact with the phosphatase PP7L to regulate gene expression and silence transposable elements in Arabidopsis thaliana.
    2. Arabidopsis genes MAIL1 and MAIN define an alternative silencing pathway independent of DNA methylation and siRNAs. Mutants for MAIL1 or MAIN exhibit release of silencing and appear to show impaired condensation of pericentromeric heterochromatin.
      Title: Arabidopsis proteins with a transposon-related domain act in gene silencing.
    3. MAIN and MAIL1 act in the same pathway, and that both are essential for maintaining correct cell division acitivity in meristematic cells, while MAIL1 has an additional function in differentiating cells.
      Title: MAIN-LIKE1 is a crucial factor for correct cell division and differentiation in Arabidopsis thaliana.
    4. MAINTENANCE OF MERISTEMS (MAIN) is required for meristem maintenance by sustaining genome integrity in stem cells and their descendants cells. [MAINTENANCE OF MERISTEMS] [MAIN]
      Title: Identification of MAIN, a factor involved in genome stability in the meristems of Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    General gene information

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    NM_001332325.1
    NM_101656.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within meristem development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in meristem maintenance IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Aminotransferase-like, plant mobile domain family protein
    NP_564042.1
    • Aminotransferase-like, plant mobile domain family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT2G25010.1); Has 691 Blast hits to 683 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 691; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6166220..6168845 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101656.3 → NP_564042.1  Aminotransferase-like, plant mobile domain family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564042.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LMT7
      UniProtKB/TrEMBL
      A0A178W571, A0A654ECS2, Q8LEM2
      Conserved Domains (1) summary
      pfam10536
      Location:50 → 392
      PMD; Plant mobile domain

    2. NM_001332325.1 → NP_001321625.1  Aminotransferase-like, plant mobile domain family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LMT7
      UniProtKB/TrEMBL
      A0A178W571, A0A654ECS2, Q8LEM2
      Conserved Domains (1) summary
      pfam10536
      Location:50 → 392
      PMD; Plant mobile domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LMT7.1

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