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    F-box and associated interaction domains-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825802, updated on 18-Sep-2024

    Summary

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    Official Full Name
    F-box and associated interaction domains-containing protein
    Primary source
    TAIR:AT4G04690
    Locus tag
    AT4G04690
    See related
    Araport:AT4G04690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T19J18.6; T19J18_6
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_003075.7 (2373999..2375135, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Met-10+ like family protein / kelch repeat-containing protein Neighboring gene Rix1 complex component Neighboring gene miscRNA Neighboring gene miscRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. F-box proteins in Arabidopsis. Xiao W, et al. Trends Plant Sci, 2000 Nov. PMID 11077244
    2. Protein degradation in signaling. Callis J, et al. Curr Opin Plant Biol, 2000 Oct. PMID 11019805
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within ubiquitin-dependent protein catabolic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    F-box and associated interaction domains-containing protein
    NP_567270.1
    • F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT3G08750.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      2373999..2375135 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116707.1 → NP_567270.1  F-box and associated interaction domains-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567270.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9S9V1
      UniProtKB/TrEMBL
      A0A5S9XRQ1
      Conserved Domains (3) summary
      smart00256
      Location:11 → 51
      FBOX; A Receptor for Ubiquitination Targets
      pfam07734
      Location:199 → 372
      FBA_1; F-box associated
      TIGR01640
      Location:96 → 296
      F_box_assoc_1; F-box protein interaction domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9S9V1.1

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