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    EMB3006 embryo defective 3006 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827676, updated on 18-Sep-2024

    Summary

    Official Symbol
    EMB3006
    Official Full Name
    embryo defective 3006
    Primary source
    TAIR:AT4G19350
    Locus tag
    AT4G19350
    See related
    Araport:AT4G19350
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    embryo defective 3006; T5K18.130; T5K18_130
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    Genomic context

    See EMB3006 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (10561950..10563757, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene kelch repeat F-box protein Neighboring gene SCD6 protein-like protein Neighboring gene SCD6 protein-like protein Neighboring gene chitin synthase, putative (DUF1218)

    General gene information

    NM_118055.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables kinetochore binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of MIS12/MIND type complex IEA
    Inferred from Electronic Annotation
    more info
     
    located_in kinetochore IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     
    part_of outer kinetochore IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    embryo defective 3006
    NP_567582.1
    • embryo defective 3006 (EMB3006); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      10561950..10563757 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118055.3NP_567582.1  embryo defective 3006 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567582.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V3V4, A0A7G2EYR2, Q8LAF5
      Conserved Domains (1) summary
      pfam03980
      Location:51144
      Nnf1