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    ENTH/VHS/GAT family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829412, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ENTH/VHS/GAT family protein
    Primary source
    TAIR:AT4G32760
    Locus tag
    AT4G32760
    See related
    Araport:AT4G32760
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F4D11.40; F4D11_40
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    10
    Sequence:
    Chromosome: 4; NC_003075.7 (15799077..15804199)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene La protein 1 Neighboring gene Homeodomain-like protein Neighboring gene uncharacterized protein Neighboring gene tRNA-Ser Neighboring gene tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein-Protein Interaction Network and Subcellular Localization of the Arabidopsis Thaliana ESCRT Machinery. Richardson LG, et al. Front Plant Sci, 2011. PMID 22639582, Free PMC Article
    2. Interactomics of Qa-SNARE in Arabidopsis thaliana. Fujiwara M, et al. Plant Cell Physiol, 2014 Apr. PMID 24556609
    3. Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. Ito J, et al. J Proteome Res, 2011 Apr 1. PMID 21166475
    4. Mapping the signaling network of BIN2 kinase using TurboID-mediated biotin labeling and phosphoproteomics. Kim TW, et al. Plant Cell, 2023 Mar 15. PMID 36660928, Free PMC Article
    5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_119429.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables ubiquitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    NOT located_in cytosol RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 

    General protein information

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    Preferred Names
    ENTH/VHS/GAT family protein
    NP_001190892.1
    • ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT3G08790.1).
    NP_195002.2
    • ENTH/VHS/GAT family protein; FUNCTIONS IN: protein transporter activity; INVOLVED IN: intracellular protein transport, intra-Golgi vesicle-mediated transport; LOCATED IN: Golgi stack, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: VHS (InterPro:IPR002014), GAT (InterPro:IPR004152), VHS subgroup (InterPro:IPR018205), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS/GAT family protein (TAIR:AT3G08790.1); Has 20336 Blast hits to 14766 proteins in 697 species: Archae - 4; Bacteria - 772; Metazoa - 8080; Fungi - 4287; Plants - 2535; Viruses - 64; Other Eukaryotes - 4594 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15799077..15804199
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203963.2 → NP_001190892.1  ENTH/VHS/GAT family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190892.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UYR5, A0A7G2F7L4, F4JV51
      Conserved Domains (3) summary
      PRK10263
      Location:352 → 541
      PRK10263; DNA translocase FtsK; Provisional
      cd03561
      Location:2 → 132
      VHS; VHS (Vps27/Hrs/STAM) domain family
      cd14231
      Location:188 → 266
      GAT_GGA-like_plant; canonical GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants

    2. NM_001342172.1 → NP_001329786.1  ENTH/VHS/GAT family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8V4
      Conserved Domains (3) summary
      PRK07764
      Location:132 → 452
      PRK07764; DNA polymerase III subunits gamma and tau; Validated
      cd03561
      Location:2 → 132
      VHS; VHS (Vps27/Hrs/STAM) domain family
      cd14231
      Location:188 → 266
      GAT_GGA-like_plant; canonical GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants

    3. NM_119429.3 → NP_195002.2  ENTH/VHS/GAT family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195002.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65525, Q8L860
      UniProtKB/TrEMBL
      A0A178UYI3, A0A5S9XYE2, A0A654FV21
      Conserved Domains (3) summary
      PRK10263
      Location:352 → 540
      PRK10263; DNA translocase FtsK; Provisional
      cd03561
      Location:2 → 132
      VHS; VHS (Vps27/Hrs/STAM) domain family
      cd14231
      Location:188 → 266
      GAT_GGA-like_plant; canonical GAT domain found in uncharacterized Golgi-localized gamma ear-containing Arf-binding protein (GGA)-like proteins mainly found in plants
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8L860.1

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