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    transport/golgi organization-like protein (DUF833) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829983, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transport/golgi organization-like protein (DUF833)
    Primary source
    TAIR:AT4G38260
    Locus tag
    AT4G38260
    See related
    Araport:AT4G38260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F22I13.30; F22I13_30
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (17936921..17938270, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene glycerol kinase Neighboring gene calcium-dependent protein kinase 26 Neighboring gene alpha-1,3-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase Neighboring gene Transmembrane amino acid transporter family protein Neighboring gene ncRNA Neighboring gene galacturonosyltransferase 3 Neighboring gene integral membrane hemolysin-III-like protein Neighboring gene hemolysin-III related integral membrane protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_119988.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    transport/golgi organization-like protein (DUF833)
    NP_568038.1
    • Protein of unknown function (DUF833); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF833 (InterPro:IPR008551); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF833) (TAIR:AT1G20680.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      17936921..17938270 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119988.5 → NP_568038.1  transport/golgi organization-like protein (DUF833) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568038.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V179, A0A7G2F6T1, F4JTM0
      Conserved Domains (1) summary
      pfam05742
      Location:1 → 256
      TANGO2; Transport and Golgi organisation 2
    Nucleotide Protein
    Heading Accession and Version

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