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    ATP binding microtubule motor family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830050, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ATP binding microtubule motor family protein
    Primary source
    TAIR:AT4G38950
    Locus tag
    AT4G38950
    See related
    Araport:AT4G38950
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F19H22.50; F19H22_50
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    16
    Sequence:
    Chromosome: 4; NC_003075.7 (18154395..18160158, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Galactose oxidase/kelch repeat superfamily protein Neighboring gene B-box type zinc finger family protein Neighboring gene fructose-bisphosphate aldolase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. Bach-Pages M, et al. Biomolecules, 2020 Apr 24. PMID 32344669, Free PMC Article
    2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    3. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001125671.2
    NM_001342515.1
    NM_001342516.1
    NM_001342517.1
    NM_120055.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables microtubule motor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in microtubule-based movement IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    ATP binding microtubule motor family protein
    NP_001119143.1
    • ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based process, microtubule-based movement; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT2G21300.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_195606.2
    • ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based process, microtubule-based movement; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3490 (InterPro:IPR021881), Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: ATP binding microtubule motor family protein (TAIR:AT2G21300.2); Has 9938 Blast hits to 9516 proteins in 306 species: Archae - 0; Bacteria - 0; Metazoa - 4372; Fungi - 1331; Plants - 1857; Viruses - 0; Other Eukaryotes - 2378 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      18154395..18160158 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001125671.2 → NP_001119143.1  ATP binding microtubule motor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001119143.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JUI9, Q0WLK7, Q9SVJ8
      UniProtKB/TrEMBL
      A0A178UTY8, A0A5S9XZW9, A0A654FWU0
      Conserved Domains (3) summary
      cd01374
      Location:13 → 335
      KISc_CENP_E; Kinesin motor domain, CENP-E/KIP2-like subgroup
      pfam11995
      Location:658 → 816
      DUF3490; Domain of unknown function (DUF3490)
      pfam13779
      Location:349 → 419
      DUF4175; Domain of unknown function (DUF4175)

    2. NM_001342515.1 → NP_001329068.1  ATP binding microtubule motor family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JUI9, Q0WLK7, Q9SVJ8
      UniProtKB/TrEMBL
      A0A178UTY8, A0A5S9XZW9, A0A654FWU0
      Conserved Domains (3) summary
      cd01374
      Location:13 → 335
      KISc_CENP_E; Kinesin motor domain, CENP-E/KIP2-like subgroup
      pfam11995
      Location:658 → 816
      DUF3490; Domain of unknown function (DUF3490)
      pfam13779
      Location:349 → 419
      DUF4175; Domain of unknown function (DUF4175)

    3. NM_120055.5 → NP_195606.2  ATP binding microtubule motor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_195606.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JUI9, Q0WLK7, Q9SVJ8
      UniProtKB/TrEMBL
      A0A178UTY8, A0A5S9XZW9, A0A654FWU0
      Conserved Domains (3) summary
      cd01374
      Location:13 → 335
      KISc_CENP_E; Kinesin motor domain, CENP-E/KIP2-like subgroup
      pfam11995
      Location:658 → 816
      DUF3490; Domain of unknown function (DUF3490)
      pfam13779
      Location:349 → 419
      DUF4175; Domain of unknown function (DUF4175)

    4. NM_001342517.1 → NP_001329067.1  ATP binding microtubule motor family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JUI9, Q0WLK7, Q9SVJ8
      UniProtKB/TrEMBL
      A0A178UTY8, A0A5S9XZW9, A0A654FWU0
      Conserved Domains (3) summary
      cd01374
      Location:13 → 335
      KISc_CENP_E; Kinesin motor domain, CENP-E/KIP2-like subgroup
      pfam11995
      Location:658 → 816
      DUF3490; Domain of unknown function (DUF3490)
      pfam13779
      Location:349 → 419
      DUF4175; Domain of unknown function (DUF4175)

    5. NM_001342516.1 → NP_001329069.1  ATP binding microtubule motor family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JUI9, Q0WLK7, Q9SVJ8
      UniProtKB/TrEMBL
      A0A178UTY8, A0A5S9XZW9, A0A654FWU0
      Conserved Domains (3) summary
      cd01374
      Location:13 → 335
      KISc_CENP_E; Kinesin motor domain, CENP-E/KIP2-like subgroup
      pfam11995
      Location:658 → 816
      DUF3490; Domain of unknown function (DUF3490)
      pfam13779
      Location:349 → 419
      DUF4175; Domain of unknown function (DUF4175)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F4JUI9.1

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