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    MYB84 myb domain protein 84 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824131, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MYB84
    Official Full Name
    myb domain protein 84
    Primary source
    TAIR:AT3G49690
    Locus tag
    AT3G49690
    See related
    Araport:AT3G49690
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATMYB84; myb domain protein 84; MYB DOMAIN PROTEIN 84; RAX3; REGULATOR OF AXILLARY MERISTEMS3
    Summary
    ''Putative homolog of the Blind gene in tomato. Together with RAX1 and RAX3 belong to the class R2R3 MYB genes; encoded by the Myb-like transcription factor MYB84, regulates axillary meristem formation. ''
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    Genomic context

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    See MYB84 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (18427735..18429281)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Leucine-rich receptor-like protein kinase family protein Neighboring gene branched-chain aminotransferase 3 Neighboring gene 1-aminocyclopropane-1-carboxylate synthase 9 Neighboring gene Pentatricopeptide repeat (PPR) superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. SKI2 mediates degradation of RISC 5'-cleavage fragments and prevents secondary siRNA production from miRNA targets in Arabidopsis. Branscheid A, et al. Nucleic Acids Res, 2015 Dec 15. PMID 26464441, Free PMC Article
    2. Blind homologous R2R3 Myb genes control the pattern of lateral meristem initiation in Arabidopsis. Müller D, et al. Plant Cell, 2006 Mar. PMID 16461581, Free PMC Article
    3. MAPK target networks in Arabidopsis thaliana revealed using functional protein microarrays. Popescu SC, et al. Genes Dev, 2009 Jan 1. PMID 19095804, Free PMC Article
    4. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    5. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_114829.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myb domain protein 84
    NP_190538.1
    • myb domain protein 84 (MYB84); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 68 (TAIR:AT5G65790.1); Has 8670 Blast hits to 8092 proteins in 466 species: Archae - 0; Bacteria - 0; Metazoa - 690; Fungi - 404; Plants - 5917; Viruses - 3; Other Eukaryotes - 1656 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18427735..18429281
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114829.4 → NP_190538.1  myb domain protein 84 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190538.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A5YZ78, A5YZ81, A5YZ92, A5YZ97, Q9M2Y9
      UniProtKB/TrEMBL
      A0A178VK29, A0A5S9XJC3, A0A654FEC5
      Conserved Domains (1) summary
      PLN03091
      Location:1 → 122
      PLN03091; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9M2Y9.1

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