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    F-box/associated interaction domain protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 825411, updated on 18-Sep-2024

    Summary

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    Official Full Name
    F-box/associated interaction domain protein
    Primary source
    TAIR:AT3G62380
    Locus tag
    AT3G62380
    See related
    Araport:AT3G62380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (23083523..23085035, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene WRKY family transcription factor Neighboring gene F-box/associated interaction domain protein Neighboring gene Carbohydrate-binding-like fold Neighboring gene heme binding protein Neighboring gene TRICHOME BIREFRINGENCE-LIKE 6 Neighboring gene cytochrome C oxidase subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_116103.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    F-box/associated interaction domain protein
    NP_191797.1
    • CONTAINS InterPro DOMAIN/s: F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT1G71320.1); Has 422 Blast hits to 419 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      23083523..23085035 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_116103.3 → NP_191797.1  F-box/associated interaction domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_191797.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VE76, Q9LZQ2
      Conserved Domains (1) summary
      TIGR01640
      Location:75 → 270
      F_box_assoc_1; F-box protein interaction domain
    Nucleotide Protein
    Heading Accession and Version

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