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    scpl35 serine carboxypeptidase-like 35 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830722, updated on 18-Sep-2024

    Summary

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    Official Symbol
    scpl35
    Official Full Name
    serine carboxypeptidase-like 35
    Primary source
    TAIR:AT5G08260
    Locus tag
    AT5G08260
    See related
    Araport:AT5G08260
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F8L15.17; serine carboxypeptidase-like 35
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    Genomic context

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    See scpl35 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Sequence:
    Chromosome: 5; NC_003076.8 (2657054..2661437)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Cytochrome P450 superfamily protein Neighboring gene C5orf35 Neighboring gene hydroxymethylbilane synthase Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_120909.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables serine-type carboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    serine carboxypeptidase-like 35
    NP_196443.1
    • serine carboxypeptidase-like 35 (scpl35); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 34 (TAIR:AT5G23210.1); Has 3632 Blast hits to 3579 proteins in 366 species: Archae - 0; Bacteria - 189; Metazoa - 629; Fungi - 858; Plants - 1539; Viruses - 0; Other Eukaryotes - 417 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      2657054..2661437
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_120909.4 → NP_196443.1  serine carboxypeptidase-like 35 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196443.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LEY1
      UniProtKB/TrEMBL
      A0A5S9Y2R7, A0A654FZH5
      Conserved Domains (1) summary
      pfam00450
      Location:44 → 471
      Peptidase_S10; Serine carboxypeptidase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LEY1.1

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