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    APT5 adenine phosphoribosyltransferase 5 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 830985, updated on 18-Sep-2024

    Summary

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    Official Symbol
    APT5
    Official Full Name
    adenine phosphoribosyltransferase 5
    Primary source
    TAIR:AT5G11160
    Locus tag
    AT5G11160
    See related
    Araport:AT5G11160
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    adenine phosphoribosyltransferase 5; F2I11.50; F2I11_50
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    Genomic context

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    See APT5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Sequence:
    Chromosome: 5; NC_003076.8 (3550300..3552255)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene phospholipase-like protein (PEARLI 4) family protein Neighboring gene vesicle-associated membrane protein 713 Neighboring gene DEAD/DEAH box RNA helicase family protein Neighboring gene glutamate receptor 2.6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Adenine phosphoribosyl transferase 1 is a key enzyme catalyzing cytokinin conversion from nucleobases to nucleotides in Arabidopsis. Zhang X, et al. Mol Plant, 2013 Sep. PMID 23658065
    2. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_121154.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables adenine phosphoribosyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables adenine phosphoribosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables adenine phosphoribosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Process Evidence Code Pubs
    involved_in AMP salvage IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in adenine salvage IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    adenine phosphoribosyltransferase 5
    NP_196677.1
    • adenine phosphoribosyltransferase 5 (APT5); FUNCTIONS IN: adenine phosphoribosyltransferase activity; INVOLVED IN: nucleoside metabolic process, adenine salvage, anaerobic respiration, nucleotide metabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Adenine phosphoribosyl transferase (InterPro:IPR005764), Phosphoribosyltransferase (InterPro:IPR000836); BEST Arabidopsis thaliana protein match is: adenine phosphoribosyl transferase 2 (TAIR:AT1G80050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      3550300..3552255
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001343159.1 → NP_001329978.1  adenine phosphoribosyltransferase 5 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B9C5
      Conserved Domains (1) summary
      PLN02293
      Location:1 → 148
      PLN02293; adenine phosphoribosyltransferase

    2. NM_121154.4 → NP_196677.1  adenine phosphoribosyltransferase 5 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196677.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LFP0
      UniProtKB/TrEMBL
      A0A178UPD1, A0A5S9Y373, A0A7G2F9T5
      Conserved Domains (1) summary
      PLN02293
      Location:1 → 187
      PLN02293; adenine phosphoribosyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LFP0.1

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