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    Cox19-like CHCH family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831998, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Cox19-like CHCH family protein
    Primary source
    TAIR:AT5G18800
    Locus tag
    AT5G18800
    See related
    Araport:AT5G18800
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17K4.50; F17K4_50
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (6266974..6268638)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene F-box/FBD-like domains containing protein Neighboring gene F-box/RNI-like superfamily protein Neighboring gene Ribosomal protein L33 family protein Neighboring gene SC35-like splicing factor 28 Neighboring gene TCP-1/cpn60 chaperonin family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Internal architecture of mitochondrial complex I from Arabidopsis thaliana. Klodmann J, et al. Plant Cell, 2010 Mar. PMID 20197505, Free PMC Article
    2. Resolving and identifying protein components of plant mitochondrial respiratory complexes using three dimensions of gel electrophoresis. Meyer EH, et al. J Proteome Res, 2008 Feb. PMID 18189341
    3. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article
    4. Evidence for network evolution in an Arabidopsis interactome map. Arabidopsis Interactome Mapping Consortium. Science, 2011 Jul 29. PMID 21798944, Free PMC Article
    5. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_121885.4
    NM_180518.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in mitochondrial electron transport, NADH to ubiquinone IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion HDA PubMed 
    located_in plastid HDA PubMed 
    part_of respiratory chain complex I HDA PubMed 
    part_of respiratory chain complex I IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Cox19-like CHCH family protein
    NP_197381.1
    • Cox19-like CHCH family protein; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT3G06310.3); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    NP_850849.1
    • Cox19-like CHCH family protein; FUNCTIONS IN: NADH dehydrogenase (ubiquinone) activity; INVOLVED IN: mitochondrial electron transport, NADH to ubiquinone; LOCATED IN: mitochondrial respiratory chain complex I; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT3G06310.3); Has 415 Blast hits to 415 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 232; Fungi - 109; Plants - 65; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6266974..6268638
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180518.4 → NP_850849.1  Cox19-like CHCH family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850849.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LGE7
      UniProtKB/TrEMBL
      A0A178UGE4, A0A5S9X9X5, A0A5S9Y606
      Conserved Domains (1) summary
      pfam06747
      Location:71 → 101
      CHCH; CHCH domain

    2. NM_121885.4 → NP_197381.1  Cox19-like CHCH family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197381.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LGE7
      UniProtKB/TrEMBL
      A0A178UGE4, A0A5S9X9X5, A0A5S9Y606
      Conserved Domains (1) summary
      pfam06747
      Location:71 → 101
      CHCH; CHCH domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LGE7.1

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