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    MYB115 myb domain protein 115 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834034, updated on 18-Sep-2024

    Summary

    Official Symbol
    MYB115
    Official Full Name
    myb domain protein 115
    Primary source
    TAIR:AT5G40360
    Locus tag
    AT5G40360
    See related
    Araport:AT5G40360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtMYB115; MPO12.8; MPO12_8; myb domain protein 115
    Summary
    putative transcription factor (MYB115)
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    Genomic context

    See MYB115 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (16144792..16146671)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Glutaredoxin family protein Neighboring gene cysteine-rich RLK (RECEPTOR-like protein kinase) 42 Neighboring gene Cytochrome c oxidase subunit Vc family protein

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_123400.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA-binding transcription factor activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    PubMed 
    enables sequence-specific DNA binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    myb domain protein 115
    NP_568581.1
    • myb domain protein 115 (MYB115); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 118 (TAIR:AT3G27785.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      16144792..16146671
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123400.2NP_568581.1  myb domain protein 115 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568581.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A0MFK5, Q1PDP9, Q6R048, Q9C5Q0, Q9FNE3
      Conserved Domains (1) summary
      cl28544
      Location:158258
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains