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    EXL3 EXORDIUM like 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 835229, updated on 18-Sep-2024

    Summary

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    Official Symbol
    EXL3
    Official Full Name
    EXORDIUM like 3
    Primary source
    TAIR:AT5G51550
    Locus tag
    AT5G51550
    See related
    Araport:AT5G51550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    EXORDIUM like 3; K17N15.10; K17N15_10
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    Genomic context

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    See EXL3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (20939363..20940895, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Zincin-like metalloproteases family protein Neighboring gene low psii accumulation2 Neighboring gene Leucine-rich repeat protein kinase family protein Neighboring gene SPFH/Band 7/PHB domain-containing membrane-associated protein family

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis cell wall proteome defined using multidimensional protein identification technology. Bayer EM, et al. Proteomics, 2006 Jan. PMID 16287169
    2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_124534.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type cell wall HDA PubMed 
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    EXORDIUM like 3
    NP_199968.1
    • EXORDIUM like 3 (EXL3); CONTAINS InterPro DOMAIN/s: Phosphate-induced protein 1 (InterPro:IPR006766); BEST Arabidopsis thaliana protein match is: EXORDIUM like 5 (TAIR:AT2G17230.1); Has 398 Blast hits to 397 proteins in 23 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      20939363..20940895 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124534.3 → NP_199968.1  EXORDIUM like 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199968.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LBE0, Q93YZ5, Q9FHM9
      UniProtKB/TrEMBL
      A0A178UHF0, A0A5S9YD33
      Conserved Domains (1) summary
      pfam04674
      Location:64 → 333
      Phi_1; Phosphate-induced protein 1 conserved region
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FHM9.1

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