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    AUG7 nuclear matrix protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831628, updated on 18-Sep-2024

    Summary

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    Official Symbol
    AUG7
    Official Full Name
    nuclear matrix protein
    Primary source
    TAIR:AT5G17620
    Locus tag
    AT5G17620
    See related
    Araport:AT5G17620
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    augmin subunit 7; K10A8.100; K10A8_100
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    Genomic context

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    See AUG7 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (5805708..5808619, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene RING/U-box superfamily protein Neighboring gene uncharacterized protein Neighboring gene Nucleotide/sugar transporter family protein Neighboring gene ncRNA Neighboring gene nuclear factor 1 A-type protein (DUF1005)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The microtubule-nucleating factor MACERATOR tethers AUGMIN7 to microtubules and governs phragmoplast architecture. Schmidt-Marcec S, et al. Plant Cell, 2024 Mar 29. PMID 38079222, Free PMC Article
    2. Characterization of the Arabidopsis augmin complex uncovers its critical function in the assembly of the acentrosomal spindle and phragmoplast microtubule arrays. Hotta T, et al. Plant Cell, 2012 Apr. PMID 22505726, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The microtubule-nucleating factor MACERATOR tethers AUGMIN7 to microtubules and governs phragmoplast architecture.
      Title: The microtubule-nucleating factor MACERATOR tethers AUGMIN7 to microtubules and governs phragmoplast architecture.
    Submit: New GeneRIF Correction

    General gene information

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    NM_121768.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables microtubule minus-end binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in phragmoplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in spindle microtubule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear matrix protein
    NP_568354.1
    • CONTAINS InterPro DOMAIN/s: Plant nuclear matrix 1 (InterPro:IPR010604); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5805708..5808619 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121768.5 → NP_568354.1  nuclear matrix protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568354.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WTP1, Q56ZN8, Q8LD35, Q9LF62
      UniProtKB/TrEMBL
      A0A178UG29, A0A5S9Y5A3
      Conserved Domains (1) summary
      pfam06694
      Location:6 → 324
      Plant_NMP1; Plant nuclear matrix protein 1 (NMP1)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q0WTP1.1

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