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    glutamyl-tRNA (Gln) amidotransferase subunit C [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831612, updated on 18-Sep-2024

    Summary

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    Official Full Name
    glutamyl-tRNA (Gln) amidotransferase subunit C
    Primary source
    TAIR:AT5G17460
    Locus tag
    AT5G17460
    See related
    Araport:AT5G17460
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    4
    Sequence:
    Chromosome: 5; NC_003076.8 (5757073..5759817, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene LUC7 related protein Neighboring gene ncRNA Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene EF hand calcium-binding protein family Neighboring gene pollen calcium-binding protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. DFR1-Mediated Inhibition of Proline Degradation Pathway Regulates Drought and Freezing Tolerance in Arabidopsis. Ren Y, et al. Cell Rep, 2018 Jun 26. PMID 29949777
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001343500.1
    NM_001343501.1
    NM_001343502.1
    NM_001343503.1
    NM_121752.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within regulation of proline metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    colocalizes_with mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    glutamyl-tRNA (Gln) amidotransferase subunit C
    NP_001318584.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress.
    NP_568348.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: mitochondrion; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5757073..5759817 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121752.4 → NP_568348.1  glutamyl-tRNA (Gln) amidotransferase subunit C [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_568348.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UFD6, A0A384KQ82, F4KH06, Q949X1

    2. NM_001343500.1 → NP_001318584.1  glutamyl-tRNA (Gln) amidotransferase subunit C [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UFD6, A0A384KQ82, F4KH06, Q949X1

    3. NM_001343501.1 → NP_001331090.1  glutamyl-tRNA (Gln) amidotransferase subunit C [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BCT0

    4. NM_001343503.1 → NP_001331089.1  glutamyl-tRNA (Gln) amidotransferase subunit C [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UFD6, A0A384KQ82, F4KH06, Q949X1

    5. NM_001343502.1 → NP_001331088.1  glutamyl-tRNA (Gln) amidotransferase subunit C [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UFD6, A0A384KQ82, F4KH06, Q949X1
    Nucleotide Protein
    Heading Accession and Version

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