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    Gadd45g growth arrest and DNA-damage-inducible 45 gamma [ Mus musculus (house mouse) ]

    Gene ID: 23882, updated on 9-Dec-2024

    Summary

    Official Symbol
    Gadd45gprovided by MGI
    Official Full Name
    growth arrest and DNA-damage-inducible 45 gammaprovided by MGI
    Primary source
    MGI:MGI:1346325
    See related
    Ensembl:ENSMUSG00000021453 AllianceGenome:MGI:1346325
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CR6; DDIT2; OIG37
    Summary
    Enables identical protein binding activity. Involved in positive regulation of cold-induced thermogenesis. Acts upstream of or within negative regulation of protein kinase activity; positive regulation of MAPK cascade; and regulation of cell cycle. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including alimentary system; central nervous system; genitourinary system; integumental system; and sensory organ. Orthologous to human GADD45G (growth arrest and DNA damage inducible gamma). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Ubiquitous expression in CNS E11.5 (RPKM 76.7), CNS E14 (RPKM 36.6) and 27 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Gadd45g in Genome Data Viewer
    Location:
    13 A5; 13 26.36 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (52000711..52002511)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (51846675..51848475)

    Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene SECIS binding protein 2 Neighboring gene sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D Neighboring gene STARR-seq mESC enhancer starr_34521 Neighboring gene STARR-positive B cell enhancer ABC_E11544 Neighboring gene STARR-positive B cell enhancer ABC_E4068 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:51862969-51863152 Neighboring gene predicted gene, 19281 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:51896377-51896617 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:51909396-51909586 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:51941838-51941947 Neighboring gene VISTA enhancer mm1565 Neighboring gene STARR-seq mESC enhancer starr_34529 Neighboring gene STARR-seq mESC enhancer starr_34531 Neighboring gene STARR-seq mESC enhancer starr_34532 Neighboring gene predicted gene, 26651 Neighboring gene STARR-seq mESC enhancer starr_34533 Neighboring gene predicted gene, 40948

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (4) 
    • Targeted (3)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nucleus TAS
    Traceable Author Statement
    more info
    PubMed 

    General protein information

    Preferred Names
    growth arrest and DNA damage-inducible protein GADD45 gamma
    Names
    cytokine-responsive protein CR6
    growth arrest and DNA-damage-inducible, gamma

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_011817.2NP_035947.2  growth arrest and DNA damage-inducible protein GADD45 gamma

      See identical proteins and their annotated locations for NP_035947.2

      Status: VALIDATED

      Source sequence(s)
      AC126247
      Consensus CDS
      CCDS26515.1
      UniProtKB/TrEMBL
      Q99M58, Q9R0S0
      Related
      ENSMUSP00000021903.3, ENSMUST00000021903.3
      Conserved Domains (1) summary
      pfam01248
      Location:24106
      Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000079.7 Reference GRCm39 C57BL/6J

      Range
      52000711..52002511
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)