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    ABCG31 pleiotropic drug resistance 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 817544, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ABCG31
    Official Full Name
    pleiotropic drug resistance 3
    Primary source
    TAIR:AT2G29940
    Locus tag
    AT2G29940
    See related
    Araport:AT2G29940
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATP-binding cassette G31; ATPDR3; F23F1.14; F23F1_14; PDR3; pleiotropic drug resistance 3; PLEIOTROPIC DRUG RESISTANCE 3
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    Genomic context

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    See ABCG31 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    20
    Sequence:
    Chromosome: 2; NC_003071.7 (12759973..12766794)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene F-box/RNI-like superfamily protein Neighboring gene ELF4-like 1 Neighboring gene cyclophilin 5 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The role of Arabidopsis ABCG9 and ABCG31 ATP binding cassette transporters in pollen fitness and the deposition of steryl glycosides on the pollen coat. Choi H, et al. Plant Cell, 2014 Jan. PMID 24474628, Free PMC Article
    2. Abscisic acid transporters cooperate to control seed germination. Kang J, et al. Nat Commun, 2015 Sep 3. PMID 26334616, Free PMC Article
    3. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    4. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. ABCG31 exports abscisic acid from the endosperm, regulating seed germination.
      Title: Abscisic acid transporters cooperate to control seed germination.
    2. ABCG9 and ABCG31 contribute to the accumulation of this sterol on the surface of pollen.
      Title: The role of Arabidopsis ABCG9 and ABCG31 ATP binding cassette transporters in pollen fitness and the deposition of steryl glycosides on the pollen coat.
    Submit: New GeneRIF Correction

    General gene information

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    NM_128548.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATPase-coupled transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables ATPase-coupled transmembrane transporter activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables efflux transmembrane transporter activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in abscisic acid transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in abscisic acid-activated signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in export from cell IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in glycoside transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in intercellular transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in negative regulation of post-embryonic development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pollen wall assembly IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in transmembrane transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasmodesma HDA PubMed 
    located_in pollen coat IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pleiotropic drug resistance 3
    NP_180555.2
    • pleiotropic drug resistance 3 (PDR3); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: drug transmembrane transport; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 12 (TAIR:AT1G15520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      12759973..12766794
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_128548.4 → NP_180555.2  pleiotropic drug resistance 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_180555.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O80878, Q7PC88
      UniProtKB/TrEMBL
      A0A178VMV6, A0A5S9X2R2
      Conserved Domains (6) summary
      cd03232
      Location:823 → 1061
      ABCG_PDR_domain2; Second domain of the pleiotropic drug resistance-like (PDR) subfamily G of ATP-binding cassette transporters
      cd03233
      Location:155 → 416
      ABCG_PDR_domain1; First domain of the pleiotropic drug resistance-like subfamily G of ATP-binding cassette transporters
      PLN03140
      Location:17 → 1426
      PLN03140; ABC transporter G family member; Provisional
      pfam01061
      Location:1156 → 1361
      ABC2_membrane; ABC-2 type transporter
      pfam08370
      Location:730 → 793
      PDR_assoc; Plant PDR ABC transporter associated
      pfam14510
      Location:77 → 151
      ABC_trans_N; ABC-transporter extracellular N-terminal
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q7PC88.1

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