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    oxidoreductase, 2OG-Fe(II) oxygenase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819420, updated on 18-Sep-2024

    Summary

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    Official Full Name
    oxidoreductase, 2OG-Fe(II) oxygenase family protein
    Primary source
    TAIR:AT2G48080
    Locus tag
    AT2G48080
    See related
    Araport:AT2G48080
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9J23.23
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (19664990..19667192, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene piezo-type mechanosensitive ion channel component Neighboring gene uncharacterized protein Neighboring gene resistance to phytophthora 1 Neighboring gene uncharacterized protein Neighboring gene Exonuclease family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_130375.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables demethylase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in mRNA catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    oxidoreductase, 2OG-Fe(II) oxygenase family protein
    NP_182329.2
    • oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G02940.1); Has 179 Blast hits to 160 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 24; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19664990..19667192 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130375.3 → NP_182329.2  oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182329.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W256, A0A5S9X7Y9, F4IN63, Q9ZU81
    Nucleotide Protein
    Heading Accession and Version

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