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    ECT11 evolutionarily conserved C-terminal region 11 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837511, updated on 18-Sep-2024

    Summary

    Official Symbol
    ECT11
    Official Full Name
    evolutionarily conserved C-terminal region 11
    Primary source
    TAIR:AT1G09810
    Locus tag
    AT1G09810
    See related
    Araport:AT1G09810
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    evolutionarily conserved C-terminal region 11; F21M12.20; F21M12_20
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    Genomic context

    See ECT11 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Sequence:
    Chromosome: 1; NC_003070.9 (3180926..3184224, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ATP phosphoribosyl transferase 2 Neighboring gene ncRNA Neighboring gene Pseudouridine synthase family protein Neighboring gene ncRNA Neighboring gene multidrug resistance protein Neighboring gene polymerase delta 4

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    NM_001331853.1
    NM_001331854.1
    NM_100854.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
     

    General protein information

    Preferred Names
    evolutionarily conserved C-terminal region 11
    NP_172452.3
    • evolutionarily conserved C-terminal region 11 (ECT11); CONTAINS InterPro DOMAIN/s: YTH domain (InterPro:IPR007275); BEST Arabidopsis thaliana protein match is: evolutionarily conserved C-terminal region 8 (TAIR:AT1G79270.1); Has 926 Blast hits to 916 proteins in 151 species: Archae - 0; Bacteria - 0; Metazoa - 416; Fungi - 98; Plants - 333; Viruses - 0; Other Eukaryotes - 79 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3180926..3184224 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100854.5NP_172452.3  evolutionarily conserved C-terminal region 11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172452.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W3G0, A0A5S9TI02, Q56XH8
      Conserved Domains (1) summary
      pfam04146
      Location:231373
      YTH; YT521-B-like domain
    2. NM_001331853.1NP_001320712.1  evolutionarily conserved C-terminal region 11 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W5H6, A1L4X2
    3. NM_001331854.1NP_001320713.1  evolutionarily conserved C-terminal region 11 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W678, A0A1P8ANN7