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    PLAC8 family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837680, updated on 18-Sep-2024

    Summary

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    Official Full Name
    PLAC8 family protein
    Primary source
    TAIR:AT1G11380
    Locus tag
    AT1G11380
    See related
    Araport:AT1G11380
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T23J18.4; T23J18_4
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (3832563..3834462)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily protein Neighboring gene Pectin lyase-like superfamily protein Neighboring gene Protein kinase superfamily protein Neighboring gene partner of Y14-MAGO Neighboring gene ncRNA Neighboring gene S-locus lectin protein kinase family protein Neighboring gene agenet domain protein (DOMAIN OF UNKNOWN FUNCTION 724 2)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Border control--a membrane-linked interactome of Arabidopsis. Jones AM, et al. Science, 2014 May 16. PMID 24833385
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_101011.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    PLAC8 family protein
    NP_563889.1
    • PLAC8 family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G05350.1); Has 314 Blast hits to 313 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 8; Plants - 293; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      3832563..3834462
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101011.3 → NP_563889.1  PLAC8 family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_563889.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W9F1, Q8LFV5
      Conserved Domains (1) summary
      TIGR01571
      Location:84 → 210
      A_thal_Cys_rich; uncharacterized Cys-rich domain
    Nucleotide Protein
    Heading Accession and Version

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