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    NmrA-like negative transcriptional regulator family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838541, updated on 18-Sep-2024

    Summary

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    Official Full Name
    NmrA-like negative transcriptional regulator family protein
    Primary source
    TAIR:AT1G19540
    Locus tag
    AT1G19540
    See related
    Araport:AT1G19540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F18O14.30; F18O14_30
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (6765653..6768290)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene pentatricopeptide (PPR) repeat-containing protein Neighboring gene DNA polymerase epsilon catalytic subunit A Neighboring gene Glutathione S-transferase family protein Neighboring gene miscRNA Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_101812.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    NmrA-like negative transcriptional regulator family protein
    NP_173385.1
    • NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: binding, catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 2081 Blast hits to 2077 proteins in 492 species: Archae - 4; Bacteria - 817; Metazoa - 4; Fungi - 543; Plants - 557; Viruses - 7; Other Eukaryotes - 149 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6765653..6768290
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332397.1 → NP_001320975.1  NmrA-like negative transcriptional regulator family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8APG5, A0A5S9V6K7

    2. NM_101812.5 → NP_173385.1  NmrA-like negative transcriptional regulator family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173385.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9V6K7, A0A654EGA6, Q29PX7
      Conserved Domains (1) summary
      pfam05368
      Location:5 → 239
      NmrA; NmrA-like family
    Nucleotide Protein
    Heading Accession and Version

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