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    MYB57 myb domain protein 57 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821113, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MYB57
    Official Full Name
    myb domain protein 57
    Primary source
    TAIR:AT3G01530
    Locus tag
    AT3G01530
    See related
    Araport:AT3G01530
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATMYB57; F4P13.8; F4P13_8; myb domain protein 57
    Summary
    Member of the R2R3 factor gene family.
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    Genomic context

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    See MYB57 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (210119..211804, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Adenine nucleotide alpha hydrolases-like superfamily protein Neighboring gene DEAD box RNA helicase 1 Neighboring gene phosphoenolpyruvate (pep)/phosphate translocator 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PIN6 is required for nectary auxin response and short stamen development. Bender RL, et al. Plant J, 2013 Jun. PMID 23551385
    2. Gibberellin acts through jasmonate to control the expression of MYB21, MYB24, and MYB57 to promote stamen filament growth in Arabidopsis. Cheng H, et al. PLoS Genet, 2009 Mar. PMID 19325888, Free PMC Article
    3. Involvement of the R2R3-MYB transcription factor MYB21 and its homologs in regulating flavonol accumulation in Arabidopsis stamen. Zhang X, et al. J Exp Bot, 2021 May 28. PMID 33831169, Free PMC Article
    4. The Jasmonate-ZIM domain proteins interact with the R2R3-MYB transcription factors MYB21 and MYB24 to affect Jasmonate-regulated stamen development in Arabidopsis. Song S, et al. Plant Cell, 2011 Mar. PMID 21447791, Free PMC Article
    5. Arabidopsis scaffold protein RACK1A interacts with diverse environmental stress and photosynthesis related proteins. Kundu N, et al. Plant Signal Behav, 2013 May. PMID 23435172, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_111019.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables promoter-specific chromatin binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within gibberellic acid mediated signaling pathway IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within jasmonic acid mediated signaling pathway IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within stamen development IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within stamen filament development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myb domain protein 57
    NP_186802.1
    • myb domain protein 57 (MYB57); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 21 (TAIR:AT3G27810.1); Has 8770 Blast hits to 8117 proteins in 470 species: Archae - 0; Bacteria - 0; Metazoa - 723; Fungi - 481; Plants - 5812; Viruses - 4; Other Eukaryotes - 1750 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      210119..211804 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111019.2 → NP_186802.1  myb domain protein 57 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_186802.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SSA1, Q9ZTD5
      UniProtKB/TrEMBL
      A0A178VG23, A0A5S9X868
      Conserved Domains (2) summary
      smart00717
      Location:80 → 127
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      pfam00249
      Location:80 → 123
      Myb_DNA-binding; Myb-like DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SSA1.1

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