adenine phosphoribosyltransferase-like protein, putative (DUF2358) [Arabidopsis thaliana (thale cress)] - Gene

Summary

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Official Full Name: adenine phosphoribosyltransferase-like protein, putative (DUF2358)
Primary source: TAIR:AT3G04890
Locus tag: AT3G04890
See related: Araport:AT3G04890
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Arabidopsis thaliana (ecotype: Columbia)
Lineage: Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as: T9J14.16; T9J14_16
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Genomic context

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See in Genome Data Viewer

Location:: chromosome: 3

Exon count:: 8

Sequence:: Chromosome: 3; NC_003074.8 (1347559..1350122)

Chromosome 3 - NC_003074.8 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_003074.8

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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NM_001125103.2

Supported by ESTs:

NM_001337546.1

Supported by ESTs:

NM_001337547.1

Supported by ESTs:

NM_111361.4

Supported by ESTs:

Gene Ontology Provided by TAIR

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
located_in nucleus	ISM Inferred from Sequence Model more info

General protein information

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Preferred Names: adenine phosphoribosyltransferase-like protein, putative (DUF2358)

NP_001118575.1

Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT2G46100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NP_566242.1

Uncharacterized conserved protein (DUF2358); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Nuclear transport factor 2 (NTF2) family protein (TAIR:AT2G46100.1); Has 198 Blast hits to 198 proteins in 56 species: Archae - 0; Bacteria - 82; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

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Reference assembly

Genomic

NC_003074.8 Reference assembly

Range

1347559..1350122

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

NM_111361.4 → NP_566242.1 adenine phosphoribosyltransferase-like protein, putative (DUF2358) [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_566242.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A654F478, Q8LFA0, Q94K63

Conserved Domains (1) summary

pfam10184
Location:78 → 191

DUF2358; Uncharacterized conserved protein (DUF2358)
NM_001337546.1 → NP_001327557.1 adenine phosphoribosyltransferase-like protein, putative (DUF2358) [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V5M3, A0A1I9LSP2

Conserved Domains (1) summary

cl09109
Location:82 → 195

NTF2_like; Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family, Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases, and the beta subunit of Ring hydroxylating dioxygenases. This family is a classic example of ...
NM_001337547.1 → NP_001327558.1 adenine phosphoribosyltransferase-like protein, putative (DUF2358) [Arabidopsis thaliana]

Status: REVIEWED

UniProtKB/TrEMBL

A0A178V5M3, A0A1I9LSP3
NM_001125103.2 → NP_001118575.1 adenine phosphoribosyltransferase-like protein, putative (DUF2358) [Arabidopsis thaliana]

See identical proteins and their annotated locations for NP_001118575.1

Status: REVIEWED

UniProtKB/TrEMBL

A0A654F478, B3H4P9, Q8LFA0

Conserved Domains (1) summary

cl09109
Location:78 → 187

NTF2_like; Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family, Delta-5-3-ketosteroid isomerases, Scytalone Dehydratases, and the beta subunit of Ring hydroxylating dioxygenases. This family is a classic example of ...