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    DHHC-type zinc finger family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819657, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DHHC-type zinc finger family protein
    Primary source
    TAIR:AT3G04970
    Locus tag
    AT3G04970
    See related
    Araport:AT3G04970
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T9J14.8; T9J14_8
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    9
    Sequence:
    Chromosome: 3; NC_003074.8 (1376154..1378500)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene SEC-C motif protein Neighboring gene trichohyalin, putative (DUF3444) Neighboring gene DNAJ heat shock N-terminal domain-containing protein Neighboring gene ncRNA Neighboring gene intracellular protein transporter Neighboring gene Transport protein particle (TRAPP) component

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_111369.4
    NM_202495.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein-cysteine S-palmitoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DHHC-type zinc finger family protein
    NP_187148.2
    • DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: DHHC-type zinc finger family protein (TAIR:AT5G50020.2); Has 5080 Blast hits to 5078 proteins in 251 species: Archae - 0; Bacteria - 0; Metazoa - 2181; Fungi - 755; Plants - 829; Viruses - 0; Other Eukaryotes - 1315 (source: NCBI BLink).
    NP_974224.1
    • DHHC-type zinc finger family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, DHHC-type (InterPro:IPR001594); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein with DHHC zinc finger domain (TAIR:AT2G14255.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1376154..1378500
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001337550.1 → NP_001326366.1  DHHC-type zinc finger family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1I9LP21

    2. NM_202495.2 → NP_974224.1  DHHC-type zinc finger family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974224.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q3EBC2
      Conserved Domains (2) summary
      pfam01529
      Location:155 → 301
      DHHC; DHHC palmitoyltransferase
      cl19890
      Location:90 → 218
      DHHC; DHHC palmitoyltransferase

    3. NM_111369.4 → NP_187148.2  DHHC-type zinc finger family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187148.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WR40, Q3EBC2, Q9CAW1
      UniProtKB/TrEMBL
      A0A178VAS0, A0A5S9X956
      Conserved Domains (2) summary
      pfam01529
      Location:155 → 305
      DHHC; DHHC palmitoyltransferase
      cl19890
      Location:90 → 218
      DHHC; DHHC palmitoyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3EBC2.1

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