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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820820, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT3G15770
    Locus tag
    AT3G15770
    See related
    Araport:AT3G15770
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    5
    Sequence:
    Chromosome: 3; NC_003074.8 (5339992..5341339)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Essential protein Yae1, N-terminal Neighboring gene cytochrome P450 family protein Neighboring gene uncharacterized protein Neighboring gene methyl-CPG-binding domain 11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plant vascular cell division is maintained by an interaction between PXY and ethylene signalling. Etchells JP, et al. PLoS Genet, 2012. PMID 23166504, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001035628.1
    NM_112447.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell division IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within phloem or xylem histogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001030705.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15350.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_188198.3
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 143 Blast hits to 143 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      5339992..5341339
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112447.4 → NP_188198.3  uncharacterized protein AT3G15770 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_188198.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XCP2, A0A654FH84, B9DGF6
      Conserved Domains (1) summary
      pfam13259
      Location:54 → 161
      DUF4050; Protein of unknown function (DUF4050)

    2. NM_001035628.1 → NP_001030705.1  uncharacterized protein AT3G15770 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001030705.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XCP2, A0A7G2EL83, F4J027
      Conserved Domains (1) summary
      pfam13259
      Location:53 → 160
      DUF4050; Protein of unknown function (DUF4050)
    Nucleotide Protein
    Heading Accession and Version

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