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    Galactose oxidase/kelch repeat superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 818209, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Galactose oxidase/kelch repeat superfamily protein
    Primary source
    TAIR:AT2G36360
    Locus tag
    AT2G36360
    See related
    Araport:AT2G36360
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F2H17.3; F2H17_3
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    17
    Sequence:
    Chromosome: 2; NC_003071.7 (15242904..15247695, complement)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein family (UPF0497) Neighboring gene DNA-binding storekeeper protein-related transcriptional regulator Neighboring gene Protein kinase superfamily protein Neighboring gene RAB6-interacting golgin (DUF662) Neighboring gene ubiquitin-protein ligase Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001036416.1
    NM_001202760.1
    NM_001202762.2
    NM_001336596.1
    NM_179932.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Galactose oxidase/kelch repeat superfamily protein
    NP_001031493.1
    • Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    NP_001189689.1
    • Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1).
    NP_001189691.1
    • Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1).
    NP_001318362.1
    • Galactose oxidase/kelch repeat superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Kelch repeat type 1 (InterPro:IPR006652), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1).
    NP_850263.1
    • Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT1G74150.1); Has 9801 Blast hits to 4098 proteins in 334 species: Archae - 8; Bacteria - 328; Metazoa - 3175; Fungi - 1216; Plants - 2882; Viruses - 0; Other Eukaryotes - 2192 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      15242904..15247695 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_179932.3 → NP_850263.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850263.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VSI7, Q8RWL1
      Conserved Domains (4) summary
      PLN02153
      Location:14 → 314
      PLN02153; epithiospecifier protein
      sd00038
      Location:20 → 73
      Kelch; KELCH repeat [structural motif]
      pfam13415
      Location:86 → 135
      Kelch_3; Galactose oxidase, central domain
      pfam13418
      Location:19 → 58
      Kelch_4; Galactose oxidase, central domain

    2. NM_001036416.1 → NP_001031493.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001031493.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VSI7, Q8RWL1
      Conserved Domains (4) summary
      PLN02153
      Location:14 → 314
      PLN02153; epithiospecifier protein
      sd00038
      Location:20 → 73
      Kelch; KELCH repeat [structural motif]
      pfam13415
      Location:86 → 135
      Kelch_3; Galactose oxidase, central domain
      pfam13418
      Location:19 → 58
      Kelch_4; Galactose oxidase, central domain

    3. NM_001202762.2 → NP_001189691.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189691.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VSI7, F4IMW1
      Conserved Domains (4) summary
      PLN02153
      Location:4 → 314
      PLN02153; epithiospecifier protein
      sd00038
      Location:20 → 73
      Kelch; KELCH repeat [structural motif]
      pfam13415
      Location:86 → 135
      Kelch_3; Galactose oxidase, central domain
      pfam13418
      Location:19 → 58
      Kelch_4; Galactose oxidase, central domain

    4. NM_001202760.1 → NP_001189689.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189689.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VSI7, F4IMW2
      Conserved Domains (4) summary
      PLN02153
      Location:67 → 323
      PLN02153; epithiospecifier protein
      sd00038
      Location:20 → 73
      Kelch; KELCH repeat [structural motif]
      pfam13415
      Location:253 → 307
      Kelch_3; Galactose oxidase, central domain
      pfam13418
      Location:19 → 58
      Kelch_4; Galactose oxidase, central domain

    5. NM_001336596.1 → NP_001318362.1  Galactose oxidase/kelch repeat superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VT45, F4IMW3
    Nucleotide Protein
    Heading Accession and Version

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