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    DUF1336 family protein (DUF1336) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 822569, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DUF1336 family protein (DUF1336)
    Primary source
    TAIR:AT3G29180
    Locus tag
    AT3G29180
    See related
    Araport:AT3G29180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    10
    Sequence:
    Chromosome: 3; NC_003074.8 (11148167..11151633)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene pseudo Neighboring gene ncRNA Neighboring gene glutamate NMDA receptor subunit epsilon-1, putative (DUF3598)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001203070.1
    NM_001339013.1
    NM_113841.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    DUF1336 family protein (DUF1336)
    NP_001189999.1
    • Protein of unknown function (DUF1336); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G39430.1).
    NP_566845.1
    • Protein of unknown function (DUF1336); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1336) (TAIR:AT5G39430.1); Has 326 Blast hits to 326 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 279; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      11148167..11151633
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_113841.3 → NP_566845.1  DUF1336 family protein (DUF1336) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566845.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VIQ7, Q93XY8, Q9LI95
      Conserved Domains (1) summary
      pfam07059
      Location:252 → 492
      DUF1336; Protein of unknown function (DUF1336)

    2. NM_001203070.1 → NP_001189999.1  DUF1336 family protein (DUF1336) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001189999.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VIQ7, Q93XY8, Q9LI95
      Conserved Domains (1) summary
      pfam07059
      Location:252 → 492
      DUF1336; Protein of unknown function (DUF1336)

    3. NM_001339013.1 → NP_001327869.1  DUF1336 family protein (DUF1336) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VIQ7, Q93XY8, Q9LI95
    Nucleotide Protein
    Heading Accession and Version

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