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    mitochondrial 28S ribosomal protein S29-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838258, updated on 18-Sep-2024

    Summary

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    Official Full Name
    mitochondrial 28S ribosomal protein S29-like protein
    Primary source
    TAIR:AT1G16870
    Locus tag
    AT1G16870
    See related
    Araport:AT1G16870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F17F16.14
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (5770732..5773322, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Ubiquitin-specific protease family C19-related protein Neighboring gene uridylyltransferase-like protein Neighboring gene ubiquitin-conjugating enzyme 36 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_101548.6

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    mitochondrial 28S ribosomal protein S29-like protein
    NP_173131.1
    • mitochondrial 28S ribosomal protein S29-related; CONTAINS InterPro DOMAIN/s: Ribosomal protein S23/S29, mitochondrial (InterPro:IPR019368); Has 239 Blast hits to 239 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 38; Plants - 38; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5770732..5773322 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101548.6 → NP_173131.1  mitochondrial 28S ribosomal protein S29-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173131.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WCT1, A0A654EAI6, Q8W4K2
      Conserved Domains (1) summary
      pfam10236
      Location:174 → 472
      DAP3; Mitochondrial ribosomal death-associated protein 3
    Nucleotide Protein
    Heading Accession and Version

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