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    SOT17 sulfotransferase 17 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838440, updated on 14-Nov-2024

    Summary

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    Official Symbol
    SOT17
    Official Full Name
    sulfotransferase 17
    Primary source
    TAIR:AT1G18590
    Locus tag
    AT1G18590
    See related
    Araport:AT1G18590
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS SULFOTRANSFERASE 5C; ATSOT17; ATST5C; F25I16.7; F25I16_7; sulfotransferase 17; SULFOTRANSFERASE 17
    Summary
    encodes a desulfoglucosinolate sulfotransferase, involved in the final step of glucosinolate core structure biosynthesis. Has a broad-substrate specificity with preference with methionine-derived desulfoglucosinolates.
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    Genomic context

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    See SOT17 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (6398531..6400029)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene myb domain protein 51 Neighboring gene galacturonosyltransferase 11 Neighboring gene RHOMBOID-like protein 12 Neighboring gene Galactose oxidase/kelch repeat superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Kinetics and substrate specificities of desulfo-glucosinolate sulfotransferases in Arabidopsis thaliana. Klein M, et al. Physiol Plant, 2009 Feb. PMID 19077143
    2. Desulfoglucosinolate sulfotransferases from Arabidopsis thaliana catalyze the final step in the biosynthesis of the glucosinolate core structure. Piotrowski M, et al. J Biol Chem, 2004 Dec 3. PMID 15358770
    3. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. AtSOT17 showed an increased specific activity with increasing chain length of ds-Gl derived from methionine.
      Title: Kinetics and substrate specificities of desulfo-glucosinolate sulfotransferases in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Homology

    NM_101717.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables aromatic desulfoglucosinolate sulfotransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within glucosinolate biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    sulfotransferase 17
    NP_173294.1
    • sulfotransferase 17 (SOT17); CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: desulfo-glucosinolate sulfotransferase 18 (TAIR:AT1G74090.1); Has 2933 Blast hits to 2889 proteins in 198 species: Archae - 0; Bacteria - 241; Metazoa - 1692; Fungi - 1; Plants - 541; Viruses - 0; Other Eukaryotes - 458 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      6398531..6400029
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101717.3 → NP_173294.1  sulfotransferase 17 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173294.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9FZ80
      UniProtKB/TrEMBL
      A0A178WDI6, A0A384KIF3, M1FZP1, M1FZV5
      Conserved Domains (1) summary
      PLN02164
      Location:1 → 346
      PLN02164; sulfotransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FZ80.1

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