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    ERD (early-responsive to dehydration stress) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828143, updated on 18-Sep-2024

    Summary

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    Official Full Name
    ERD (early-responsive to dehydration stress) family protein
    Primary source
    TAIR:AT4G02900
    Locus tag
    AT4G02900
    See related
    Araport:AT4G02900
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T5J8.22; T5J8_22
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    11
    Sequence:
    Chromosome: 4; NC_003075.7 (1283655..1287832)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene ELKS/Rab6-interacting/CAST family protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ubiquitin family protein Neighboring gene ncRNA Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables calcium-activated cation channel activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    ERD (early-responsive to dehydration stress) family protein
    NP_192199.1
    • ERD (early-responsive to dehydration stress) family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF221 (InterPro:IPR003864); BEST Arabidopsis thaliana protein match is: ERD (early-responsive to dehydration stress) family protein (TAIR:AT3G21620.1); Has 1474 Blast hits to 1292 proteins in 188 species: Archae - 0; Bacteria - 2; Metazoa - 189; Fungi - 715; Plants - 435; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      1283655..1287832
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001340407.1 → NP_001328397.1  ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B4H7

    2. NM_001340408.1 → NP_001328398.1  ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UWY1, A0A1P8B4I8, A0A5S9XQ82, A0A654FLD3
      Conserved Domains (2) summary
      COG5594
      Location:72 → 753
      COG5594; Uncharacterized integral membrane protein [Function unknown]
      pfam02714
      Location:371 → 642
      RSN1_7TM; Calcium-dependent channel, 7TM region, putative phosphate

    3. NM_001340409.1 → NP_001328396.1  ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UWY1, A0A1P8B4I8, A0A5S9XQ82, A0A654FLD3
      Conserved Domains (2) summary
      COG5594
      Location:72 → 753
      COG5594; Uncharacterized integral membrane protein [Function unknown]
      pfam02714
      Location:371 → 642
      RSN1_7TM; Calcium-dependent channel, 7TM region, putative phosphate

    4. NM_116524.2 → NP_192199.1  ERD (early-responsive to dehydration stress) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_192199.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SY14, Q9ZT88
      UniProtKB/TrEMBL
      A0A097NUP8, A0A178UWY1, A0A654FLD3
      Conserved Domains (3) summary
      pfam02714
      Location:320 → 643
      RSN1_7TM; Calcium-dependent channel, 7TM region, putative phosphate
      pfam13967
      Location:30 → 177
      RSN1_TM; Late exocytosis, associated with Golgi transport
      pfam14703
      Location:235 → 298
      PHM7_cyt; Cytosolic domain of 10TM putative phosphate transporter
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SY14.1

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