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    TRE1 trehalase 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828504, updated on 18-Sep-2024

    Summary

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    Official Symbol
    TRE1
    Official Full Name
    trehalase 1
    Primary source
    TAIR:AT4G24040
    Locus tag
    AT4G24040
    See related
    Araport:AT4G24040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATTRE1; T19F6.30; T19F6_30; trehalase 1
    Summary
    Encodes a trehalase, member of Glycoside Hydrolase Family 37.
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    Genomic context

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    See TRE1 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Sequence:
    Chromosome: 4; NC_003075.7 (12488040..12491298)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Gly Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Plant drought tolerance provided through genome editing of the trehalase gene. Nuñez-Muñoz L, et al. Plant Signal Behav, 2021 Apr 3. PMID 33570447, Free PMC Article
    2. Overexpression of the trehalase gene AtTRE1 leads to increased drought stress tolerance in Arabidopsis and is involved in abscisic acid-induced stomatal closure. Van Houtte H, et al. Plant Physiol, 2013 Mar. PMID 23341362, Free PMC Article
    3. The Arabidopsis thaliana trehalase is a plasma membrane-bound enzyme with extracellular activity. Frison M, et al. FEBS Lett, 2007 Aug 21. PMID 17673210
    4. Trehalose and trehalase in Arabidopsis. Müller J, et al. Plant Physiol, 2001 Feb. PMID 11161063, Free PMC Article
    5. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Plant drought tolerance provided through genome editing of the trehalase gene.
      Title: Plant drought tolerance provided through genome editing of the trehalase gene.
    2. overexpression of plant trehalase improves drought stress tolerance in Arabidopsis.
      Title: Overexpression of the trehalase gene AtTRE1 leads to increased drought stress tolerance in Arabidopsis and is involved in abscisic acid-induced stomatal closure.
    3. Arabidopsis trehalase is a plasma membrane-bound protein, probably anchored to the membrane through a predicted N-terminal membrane spanning domain.
      Title: The Arabidopsis thaliana trehalase is a plasma membrane-bound enzyme with extracellular activity.
    Submit: New GeneRIF Correction

    General gene information

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    NM_118536.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables alpha,alpha-trehalase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within trehalose catabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    trehalase 1
    NP_194135.1
    • trehalase 1 (TRE1); CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 37 (InterPro:IPR001661), Six-hairpin glycosidase-like (InterPro:IPR008928), Glycoside hydrolase, family 37, conserved site (InterPro:IPR018232); Has 1925 Blast hits to 1909 proteins in 569 species: Archae - 2; Bacteria - 1056; Metazoa - 507; Fungi - 235; Plants - 71; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12488040..12491298
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118536.4 → NP_194135.1  trehalase 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194135.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O22986, Q9SU50
      UniProtKB/TrEMBL
      A0A178UTR3, A0A5S9XVS7
      Conserved Domains (1) summary
      PLN02567
      Location:74 → 625
      PLN02567; alpha,alpha-trehalase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SU50.1

    Gene LinkOut

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