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    DDRGK domain protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828820, updated on 18-Sep-2024

    Summary

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    Official Full Name
    DDRGK domain protein
    Primary source
    TAIR:AT4G27120
    Locus tag
    AT4G27120
    See related
    Araport:AT4G27120
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T24A18.70; T24A18_70
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    8
    Sequence:
    Chromosome: 4; NC_003075.7 (13601948..13604494, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene COBRA-like protein 11 precursor Neighboring gene ncRNA Neighboring gene Translation initiation factor SUI1 family protein Neighboring gene seed storage albumin 1 Neighboring gene seed storage albumin 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118846.4
    NM_179125.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    DDRGK domain protein
    NP_567767.1
    • CONTAINS InterPro DOMAIN/s: DDRGK domain (InterPro:IPR019153); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    NP_849456.1
    • CONTAINS InterPro DOMAIN/s: DDRGK domain (InterPro:IPR019153); Has 14775 Blast hits to 8764 proteins in 778 species: Archae - 29; Bacteria - 1878; Metazoa - 5164; Fungi - 1447; Plants - 582; Viruses - 164; Other Eukaryotes - 5511 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      13601948..13604494 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001341837.1 → NP_001328633.1  DDRGK domain protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B577

    2. NM_118846.4 → NP_567767.1  DDRGK domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567767.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LAA5, Q94C53, Q9T046
      UniProtKB/TrEMBL
      A0A178UZS7, A0A5S9XWA2, A0A654FTA9
      Conserved Domains (1) summary
      pfam09756
      Location:107 → 276
      DDRGK; DDRGK domain

    3. NM_179125.4 → NP_849456.1  DDRGK domain protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849456.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LAA5, Q94C53, Q9T046
      UniProtKB/TrEMBL
      A0A178UZS7, A0A5S9XWA2, A0A654FTA9
      Conserved Domains (1) summary
      pfam09756
      Location:107 → 276
      DDRGK; DDRGK domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q94C53.1

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