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    CemA-like proton extrusion protein-like protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829231, updated on 18-Sep-2024

    Summary

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    Official Full Name
    CemA-like proton extrusion protein-like protein
    Primary source
    TAIR:AT4G31040
    Locus tag
    AT4G31040
    See related
    Araport:AT4G31040
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F6I18.50; F6I18_50
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (15111477..15114126, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Calmodulin-binding protein Neighboring gene RNA-binding CRS1 / YhbY (CRM) domain-containing protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene Putative membrane lipoprotein Neighboring gene Biotin/lipoate A/B protein ligase family Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene PPR superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. DAY-LENGTH-DEPENDENT DELAYED-GREENING1, the Arabidopsis Homolog of the Cyanobacterial H+-Extrusion Protein, Is Essential for Chloroplast pH Regulation and Optimization of Non-Photochemical Quenching. Harada K, et al. Plant Cell Physiol, 2019 Dec 1. PMID 31665522
    2. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_119254.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables potassium:proton antiporter activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within nonphotochemical quenching IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in potassium ion transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within proton transmembrane transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in regulation of intracellular pH IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast envelope IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CemA-like proton extrusion protein-like protein
    NP_567865.1
    • CemA-like proton extrusion protein-related; INVOLVED IN: biological_process unknown; LOCATED IN: integral to membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CemA (InterPro:IPR004282); BEST Arabidopsis thaliana protein match is: CemA-like proton extrusion protein-related (TAIR:ATCG00530.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15111477..15114126 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119254.3 → NP_567865.1  CemA-like proton extrusion protein-like protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567865.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O65546, Q67YB4, Q67YG9, Q67Z96, Q681Z5, Q8LBP9, Q8RXP7
      UniProtKB/TrEMBL
      A0A178V0Y9, A0A654FUH3, A0A7G2F3Q7
      Conserved Domains (1) summary
      pfam03040
      Location:207 → 436
      CemA; CemA family
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RXP7.1

    Gene LinkOut

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