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    Pollen Ole e 1 allergen and extensin family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819367, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Pollen Ole e 1 allergen and extensin family protein
    Primary source
    TAIR:AT2G47540
    Locus tag
    AT2G47540
    See related
    Araport:AT2G47540
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T30B22.16
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_003071.7 (19505827..19506681)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene Integrase-type DNA-binding superfamily protein Neighboring gene Pollen Ole e 1 allergen and extensin family protein Neighboring gene Plant invertase/pectin methylesterase inhibitor superfamily Neighboring gene ncRNA Neighboring gene RING/U-box superfamily protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_130322.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Pollen Ole e 1 allergen and extensin family protein
    NP_182276.1
    • Pollen Ole e 1 allergen and extensin family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Pollen Ole e 1 allergen/extensin (InterPro:IPR006041); BEST Arabidopsis thaliana protein match is: root hair specific 13 (TAIR:AT4G02270.1); Has 149 Blast hits to 149 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      19505827..19506681
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_130322.4 → NP_182276.1  Pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_182276.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X8L7, O22257
      Conserved Domains (1) summary
      pfam01190
      Location:39 → 129
      Pollen_Ole_e_I; Pollen proteins Ole e I like
    Nucleotide Protein
    Heading Accession and Version

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