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    early endosome antigen-like protein, putative (DUF3444) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819673, updated on 18-Sep-2024

    Summary

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    Official Full Name
    early endosome antigen-like protein, putative (DUF3444)
    Primary source
    TAIR:AT3G05110
    Locus tag
    AT3G05110
    See related
    Araport:AT3G05110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T12H1.7; T12H1_7
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (1426107..1427719, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene ncRNA Neighboring gene S-adenosyl-L-methionine-dependent methyltransferases superfamily protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene paramyosin-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_111383.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    early endosome antigen-like protein, putative (DUF3444)
    NP_187162.1
    • CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT3G04960.4); Has 6844 Blast hits to 4546 proteins in 547 species: Archae - 38; Bacteria - 684; Metazoa - 1857; Fungi - 441; Plants - 665; Viruses - 148; Other Eukaryotes - 3011 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1426107..1427719 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111383.2 → NP_187162.1  early endosome antigen-like protein, putative (DUF3444) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187162.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9X968, Q9MAA8
      Conserved Domains (1) summary
      pfam11926
      Location:158 → 352
      DUF3444; Domain of unknown function (DUF3444)
    Nucleotide Protein
    Heading Accession and Version

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