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    NUDT16 nudix hydrolase homolog 16 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820440, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NUDT16
    Official Full Name
    nudix hydrolase homolog 16
    Primary source
    TAIR:AT3G12600
    Locus tag
    AT3G12600
    See related
    Araport:AT3G12600
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    atnudt16; nudix hydrolase homolog 16
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    Genomic context

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    See NUDT16 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (4004469..4006330)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Oligosaccaryltransferase Neighboring gene tRNA-Arg Neighboring gene uncharacterized protein Neighboring gene Leucine-rich repeat (LRR) family protein Neighboring gene Protein phosphatase 2C family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001084673.1
    NM_112095.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables pyrophosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    nudix hydrolase homolog 16
    NP_001078142.1
    • nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1172 Blast hits to 1171 proteins in 346 species: Archae - 0; Bacteria - 480; Metazoa - 236; Fungi - 118; Plants - 233; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
    NP_566428.1
    • nudix hydrolase homolog 16 (NUDT16); FUNCTIONS IN: hydrolase activity; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase, conserved site (InterPro:IPR020084), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 12 (TAIR:AT1G12880.1); Has 1169 Blast hits to 1168 proteins in 345 species: Archae - 0; Bacteria - 470; Metazoa - 236; Fungi - 123; Plants - 235; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      4004469..4006330
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_112095.4 → NP_566428.1  nudix hydrolase homolog 16 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566428.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      A8MR20, Q9LHK1
      UniProtKB/TrEMBL
      A0A178VBK9, A0A5S9XBG5, A0A654F6G4
      Conserved Domains (1) summary
      cd04666
      Location:21 → 155
      Nudix_Hydrolase_9; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...

    2. NM_001084673.1 → NP_001078142.1  nudix hydrolase homolog 16 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078142.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654F6G4
      Conserved Domains (1) summary
      cd04666
      Location:12 → 146
      Nudix_Hydrolase_9; Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LHK1.1

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