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    Sterile alpha motif (SAM) domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 820362, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Sterile alpha motif (SAM) domain-containing protein
    Primary source
    TAIR:AT3G11890
    Locus tag
    AT3G11890
    See related
    Araport:AT3G11890
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (3755456..3757842)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Endoribonuclease/protein kinase IRE1-like protein Neighboring gene transmembrane protein, putative (Protein of unknown function DUF2359, transmembrane) Neighboring gene aromatic and neutral transporter 1 Neighboring gene ubiquitin-specific protease 13 Neighboring gene glutaredoxin-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001337955.1
    NM_001337956.1
    NM_001337957.1
    NM_001337958.1
    NM_001337959.1
    NM_112022.2
    NM_202561.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Sterile alpha motif (SAM) domain-containing protein
    NP_566404.1
    • Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11860.1); Has 845 Blast hits to 523 proteins in 122 species: Archae - 0; Bacteria - 34; Metazoa - 393; Fungi - 118; Plants - 48; Viruses - 10; Other Eukaryotes - 242 (source: NCBI BLink).
    NP_974290.1
    • Sterile alpha motif (SAM) domain-containing protein; CONTAINS InterPro DOMAIN/s: Sterile alpha motif (InterPro:IPR001660), Sterile alpha motif homology (InterPro:IPR010993), Sterile alpha motif, type 2 (InterPro:IPR011510); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      3755456..3757842
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_202561.3 → NP_974290.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974290.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XBU8, Q9SF10
      Conserved Domains (1) summary
      pfam07647
      Location:460 → 516
      SAM_2; SAM domain (Sterile alpha motif)

    2. NM_112022.2 → NP_566404.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566404.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EKX6, Q9FDY0
      Conserved Domains (1) summary
      pfam07647
      Location:433 → 489
      SAM_2; SAM domain (Sterile alpha motif)

    3. NM_001337955.1 → NP_001326446.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XBU8, Q9SF10
      Conserved Domains (1) summary
      pfam07647
      Location:460 → 516
      SAM_2; SAM domain (Sterile alpha motif)

    4. NM_001337956.1 → NP_001326445.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EKX6, Q9FDY0
      Conserved Domains (1) summary
      pfam07647
      Location:433 → 489
      SAM_2; SAM domain (Sterile alpha motif)

    5. NM_001337957.1 → NP_001326444.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XBU8, Q9SF10
      Conserved Domains (1) summary
      pfam07647
      Location:460 → 516
      SAM_2; SAM domain (Sterile alpha motif)

    6. NM_001337958.1 → NP_001326443.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EKX6, Q9FDY0
      Conserved Domains (1) summary
      pfam07647
      Location:433 → 489
      SAM_2; SAM domain (Sterile alpha motif)

    7. NM_001337959.1 → NP_001326442.1  Sterile alpha motif (SAM) domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A7G2EKX6, Q9FDY0
      Conserved Domains (1) summary
      pfam07647
      Location:433 → 489
      SAM_2; SAM domain (Sterile alpha motif)
    Nucleotide Protein
    Heading Accession and Version

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